| MirGeneDB ID | Mml-Mir-488 |
|---|
| Family name |
MIR-488 (all species) |
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| Species |
Rhesus monkey (Macaca mulatta) |
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| MiRBase ID |
mml-mir-488
|
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| Paralogues |
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| Orthologues |
Bta-Mir-488
Cfa-Mir-488
Cja-Mir-488
Dno-Mir-488
Eca-Mir-488
Ete-Mir-488
Hsa-Mir-488
Laf-Mir-488
Mmr-Mir-488
Mmu-Mir-488
Ocu-Mir-488
Pab-Mir-488
Rno-Mir-488
|
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCA_003339765.3_Mmul_10_traces) |
CM014336.1: 34274143-34274201 [-]
UCSC
Ensembl
|
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| Seed |
UGAAAGG |
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Precursor
(pre-Mir +30nt flank) |
UAGAGUGGAAAAUUUCAGAGAAUCAUCUCUCCCAGAUAAUGGCACUCUCAAACAAGUUUCCAAGUUGUUUGAAAGGCUAUUUCUUGGUCAGAUGACUCUCAAUUUCUUCUGGAAGACUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UAGAGUGGAAAAUUUCA--| A CU C U A C AAGUUU
GAGA UCAUCU CC AGA AAUGGC CU UCAAAC \
CUCU AGUAGA GG UCU UUAUCG GA AGUUUG C
CUCAGAAGGUCUUCUUUAA^ C CU U - - A UUGAAC
110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Yes
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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| Star sequence |
Mml-Mir-488_5p* |
| mirBase accession | MIMAT0026882 |
|---|
| Sequence |
0- CCCAGAUAAUGGCACUCUCAAAC -23
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mml-miR-488-5p
|
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| Mature sequence |
Mml-Mir-488_3p |
| mirBase accession | MIMAT0006348 |
|---|
| Sequence |
38- UUGAAAGGCUAUUUCUUGGUC -59
Get sequence
|
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| Proposed targets |
TargetScanVert: mml-miR-488-3p
|
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