| MirGeneDB ID | Mml-Mir-580 |
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| Family name |
MIR-580 (all species) |
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| Species |
Rhesus monkey (Macaca mulatta) |
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| MiRBase ID |
mml-mir-580
|
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| Paralogues |
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| Orthologues |
Cja-Mir-580
Hsa-Mir-580
Pab-Mir-580
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| Node of Origin (locus) |
Simiiformes
|
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| Node of Origin (family) |
Simiiformes
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Genome context
(GCA_003339765.3_Mmul_10_traces) |
CM014341.1: 35950949-35951009 [-]
UCSC
Ensembl
|
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| Seed |
UGAGUCU |
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Precursor
(pre-Mir +30nt flank) |
UGAAGUUAGAUAAAAUUUCCAGUUGGAACCUAAUGAUUCAUCAGACUCAGAUAUUUAAGUUAACAGUAUUUGAGUCUGAUGAAUCAUUAGGUUCCAGUCAGAAAUUUUUCAUUCAGUUUCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGAAGUUAGAUAAAAUUUCCAG--| AUUUAAG
UUGGAACCUAAUGAUUCAUCAGACUCAGAU \
GACCUUGGAUUACUAAGUAGUCUGAGUUUA U
ACUUUGACUUACUUUUUAAAGACU^ UGACAAU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
| Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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| Star sequence |
Mml-Mir-580_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- UAAUGAUUCAUCAGACUCAGAU -22
Get sequence
|
|---|
| Mature sequence |
Mml-Mir-580_3p |
| mirBase accession | MIMAT0006441 |
|---|
| Sequence |
39- UUGAGUCUGAUGAAUCAUUAGG -61
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mml-miR-580
|
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