| MirGeneDB ID | Mmr-Mir-342 |
| Family name |
MIR-342 (all species) |
| Species |
Gray mouse lemur (Microcebus murinus) |
| MiRBase ID |
mmr-mir-342
|
| Paralogues |
|
| Orthologues |
Bta-Mir-342
Cfa-Mir-342
Cja-Mir-342
Cpo-Mir-342
Dno-Mir-342
Eca-Mir-342
Ete-Mir-342
Hsa-Mir-342
Laf-Mir-342
Mml-Mir-342
Mmu-Mir-342
Ocu-Mir-342
Pab-Mir-342
Rno-Mir-342
|
| Node of Origin (locus) |
Eutheria
|
| Node of Origin (family) |
Eutheria
|
Genome context (GCA_000165445.3_Mmur_3.0_genomic) |
CM007663.1: 10885935-10886001 [+]
UCSC
Ensembl
|
| Seed |
CUCACAC |
Precursor (pre-Mir +30nt flank) |
CUGCAAGCCUGCGAAACUGGGCUCAAGGUGAGGGGUGCUAUCUGUGAUUGAGGGACAUGGACAAUGGAAUUGUCUCACACAGAAAUCGCACCCGUCACCUUGGCCUACUUAGCACCACCCCAGACAA
Get precursor sequence
|
| Structure | 10 20 30 40 50 60
CUGCAAGCCUGCGAAAC--- U G UA--| AUUGA UGGACA
UGGGC CAAGGUGA GGGUGC UCUGUG GGGACA \
AUCCG GUUCCACU CCCACG AGACAC CUCUGU A
AACAGACCCCACCACGAUUC - G CUAA^ A---- UAAGGU
120 110 100 90 80 70 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
No
|
| Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
| Star sequence |
Mmr-Mir-342_5p* |
| mirBase accession | None |
| Sequence |
0- AGGGGUGCUAUCUGUGAUUGAGGGACA -27
Get sequence
|
| Mature sequence |
Mmr-Mir-342_3p |
| mirBase accession | MIMAT0049166 |
| Sequence |
42- UCUCACACAGAAAUCGCACCCGUCA -67
Get sequence
|