| MirGeneDB ID | Mmr-Mir-483 |
| Family name |
MIR-483 (all species) |
| Species |
Gray mouse lemur (Microcebus murinus) |
| MiRBase ID |
|
| Paralogues |
|
| Orthologues |
Bta-Mir-483-v1
Cfa-Mir-483
Cja-Mir-483
Cpo-Mir-483
Dno-Mir-483
Eca-Mir-483-v1
Ete-Mir-483
Hsa-Mir-483
Mml-Mir-483
Mmu-Mir-483
Neu-Mir-483
Ocu-Mir-483
Pab-Mir-483
Rno-Mir-483
Sha-Mir-483
|
| Node of Origin (locus) |
Theria
|
| Node of Origin (family) |
Theria
|
Genome context (GCA_000165445.3_Mmur_3.0_genomic) |
CM007665.1: 10471986-10472046 [-]
UCSC
Ensembl
|
| Seed |
AGGCGGG |
Precursor (pre-Mir +30nt flank) |
CAGCUGAGCCCUGCCGUGGGGGAGAGGGGGAAGGCGGGAGGGAAGAAGCGAGUGGUUCCAUGGCCUCCUCACUCCUCUCCUCCCGUCUUCUCCUCUCCUGCCUGUGCCUGCCUGCCUCGGC
Get precursor sequence
|
| Structure | 10 20 30 40 50
CAGCUGAGCCCUGCCGU-- -| G GA A C UGGUUCC
GG GGGAGAGGGG AAGGCGGGAGG AG AG GAG \
CC UCCUCUCCUC UUCUGCCCUCC UC UC CUC A
CGGCUCCGUCCGUCCGUGU G^ - UC C A CUCCGGU
. 110 100 90 80 70 |
| Deep sequencing |
Go to detailed chart
|
| Comment | There is a second dicer cut -1 on both arms |
| 3' NTU |
No
|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
| Mature sequence |
Mmr-Mir-483_5p |
| mirBase accession | None |
| Sequence |
0- AAGGCGGGAGGGAAGAAGCGAGU -23
Get sequence
|
| Star sequence |
Mmr-Mir-483_3p* |
| mirBase accession | None |
| Sequence |
38- UCACUCCUCUCCUCCCGUCUUCU -61
Get sequence
|