MirGeneDB 3.0
MirGeneDB ID

Mmu-Mir-147

Family name MIR-147 (all species)
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-147
Paralogues
Orthologues Aca-Mir-147-v1  Ami-Mir-147-v1  Bta-Mir-147  Cfa-Mir-147-P1-v1  Cfa-Mir-147-P2-v1  Cja-Mir-147  Cli-Mir-147  Cmi-Mir-147  Cpi-Mir-147-v1  Cpo-Mir-147-v1  Dno-Mir-147-v1  Eca-Mir-147  Gga-Mir-147  Gja-Mir-147-P3a-v1  Gja-Mir-147-P3b-v1  Hsa-Mir-147-v1  Laf-Mir-147-P4  Laf-Mir-147-P5  Lch-Mir-147  Loc-Mir-147-v1  Mal-Mir-147-v1  Mdo-Mir-147  Mml-Mir-147  Mmr-Mir-147  Neu-Mir-147  Oan-Mir-147  Ocu-Mir-147  Pab-Mir-147  Pbv-Mir-147-v1  Pma-Mir-147  Rno-Mir-147-v1  Sha-Mir-147  Spt-Mir-147  Tgu-Mir-147  Tni-Mir-147 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(mm10)		 chr2: 122640813-122640871 [+] UCSC Ensembl
Seed UGUGCGG
Precursor
(pre-Mir +30nt flank)		 
CUCUCUUCCAAAGAACACUCUAUGAAUCUAGUGGAAACAUUUCUGCACAAACUAGAUGUUGAUGCCAGUGUGCGGAAAUGCUUCUGCUACAUUUGUAGGGUUUGCCUGCAUUCUUUGGA
Get precursor sequence
Structure
        10          20        30        40        50         
CUCUCUUCCAAAGAACA--|    UG   C   UG   A            AACUAGAUG 
                   CUCUA  AAU UAG  GAA CAUUUCUGCACA         \
                   GGGAU  UUA AUC  CUU GUAAAGGCGUGU         U
AGGUUUCUUACGUCCGUUU^    GU   C   GU   C            GACCGUAGU 
       110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Drosha cut +1 on the 5p arm.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Star sequence

Mmu-Mir-147_5p*
mirBase accessionMIMAT0017269
Sequence 
0- GUGGAAACAUUUCUGCACAAACU -23
Get sequence
Proposed targets TargetScanVert: mmu-miR-147-5p
miRDB: MIMAT0017269
Mature sequence

Mmu-Mir-147_3p
mirBase accessionMIMAT0004857
Sequence 
37- GUGUGCGGAAAUGCUUCUGCUA -59
Get sequence
Proposed targets microrna.org: MIMAT0004857
TargetScanVert: mmu-miR-147-3p
miRDB: MIMAT0004857