| MirGeneDB ID | Npo-Mir-1989 |
|---|---|
| Family name | MIR-1989 (all species) |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Agr-Mir-1989 Cte-Mir-1989 Hru-Mir-1989-P4a Hru-Mir-1989-P4b Lan-Mir-1989-P1 Lan-Mir-1989-P2 Lan-Mir-1989-P3 Lgi-Mir-1989 Llo-Mir-1989 Mgi-Mir-1989 Mom-Mir-1989 Ofu-Mir-1989 Pau-Mir-1989 Pcr-Mir-1989 Pdu-Mir-1989-P5 Pdu-Mir-1989-P6 Pdu-Mir-1989-P7 Pdu-Mir-1989-P8 Pdu-Mir-1989-P9 Pdu-Mir-1989-P10 Pve-Mir-1989 Rph-Mir-1989 Sma-Mir-1989 Sme-Mir-1989 Snu-Mir-1989 |
| Node of Origin (locus) | Platytrochozoa |
| Node of Origin (family) | Platytrochozoa |
| Genome context (GCA_018389105_NPO) |
JACATO010000654.1: 597583-597645 [-] Ensembl |
| Seed | CAGCUGU |
| Precursor (pre-Mir +30nt flank) |
CUUUUUCUUAAGAAAUGGAGAUUCUGCGUUUCAGCUGUCAUGAUGCCUUUUUUAGUAAAAUUAGAAUACAGAAAGUCAUUAAGACAGCUGUUAUACCGUAUCCCCGUUCACUGCUGACGAAGAGet precursor sequence |
| Structure | 10 20 30 40 50 60 CUUUUUCUUAAGAAAUGGAGAUUC UUU---| A C UAGUAAAA UGCG CAGCUGUC UGAUG CUUUUU \ AUGC GUCGACAG AUUAC GAAAGA U AGAAGCAGUCGUCACUUGCCCCU- CAUAUU^ A U CAUAAGAU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Npo-Mir-1989_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UCAGCUGUCAUGAUGCCUUUUU -22
Get sequence
|
| Star sequence | Npo-Mir-1989_3p* (predicted) |
| mirBase accession | None |
| Sequence |
41- AAAGUCAUUAAGACAGCUGUUA -63
Get sequence
|
