| MirGeneDB ID | Npo-Mir-242 |
|---|---|
| Family name | MIR-242 (all species) |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Agr-Mir-242 Ava-Mir-242-P9 Ava-Mir-242-P10 Bfl-Mir-242 Bko-Mir-242 Bla-Mir-242-v1 Bpl-Mir-242 Cbr-Mir-242 Cel-Mir-242 Cte-Mir-242 Eba-Mir-242 Hru-Mir-242-P3a Hru-Mir-242-P3b Lan-Mir-242 Lgi-Mir-242-P1 Lgi-Mir-242-P2 Lhy-Mir-242 Mgi-Mir-242 Mom-Mir-242 Nag-Mir-242-P7 Nag-Mir-242-P8 Ofu-Mir-242 Pau-Mir-242 Pca-Mir-242 Pdu-Mir-242-P4a Pdu-Mir-242-P4b Pdu-Mir-242-P4c Pdu-Mir-242-P4d Pfl-Mir-242 Pmi-Mir-242 Pve-Mir-242-P5 Pve-Mir-242-P6 Rph-Mir-242 Sko-Mir-242 Snu-Mir-242 Spu-Mir-242 War-Mir-242 |
| Node of Origin (locus) | Nephrozoa |
| Node of Origin (family) | Nephrozoa |
| Genome context (GCA_018389105_NPO) |
JACATO010000680.1: 783878-783934 [-] Ensembl |
| Seed | UGCGUAG |
| Precursor (pre-Mir +30nt flank) |
ACUUAAACAUUUUUUUCUGCCUUCAAGUUGUUGCGUAGGCGUUUUGCGUAGGUUGGAUAUACUGCUAUGCAUUUCUCCUAGGCAUCAUCUUGUGGGUGUCAGCUUCCGAAUCUCAACGet precursor sequence |
| Structure | 10 20 30 40 50 ACUUAAACAUUUUUUUCU--| U U U G CGUUU GUUGGA GCCU CAAG UG UGC UAGG UGCGUAG \ UGGG GUUC AC ACG AUCC ACGUAUC U CAACUCUAAGCCUUCGACUG^ U U U G UCUUU GUCAUA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Npo-Mir-242_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UUGCGUAGGCGUUUUGCGUAGG -22
Get sequence
|
| Star sequence | Npo-Mir-242_3p* (predicted) |
| mirBase accession | None |
| Sequence |
35- UAUGCAUUUCUCCUAGGCAUCA -57
Get sequence
|
