MirGeneDB 3.0
MirGeneDB ID

Nve-Mir-2043-P1

Family name MIR-2043 (all species)
Species Starlet sea anemone (Nematostella vectensis)
MiRBase ID nve-mir-2043-2
Paralogues Nve-Mir-2043-P2a  Nve-Mir-2043-P2b 
Orthologues
Node of Origin (locus) N. vectensis
Node of Origin (family) N. vectensis
Genome context
(GCF_000209225.1_ASM20922v1_NVE)		 NW_001834400.1: 1321803-1321853 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-2043-P1)		 Mir-2043-P1 NW_001834400.1: 1321803-1321853 [+] Ensembl
Mir-2043-P2a NW_001834400.1: 1324956-1325006 [+] Ensembl
Mir-2043-P2b NW_001834400.1: 1335139-1335189 [+] Ensembl
Seed AUAUCGC
Precursor
(pre-Mir +30nt flank)		 
UCAAGAGACAGUAUCUGAUAUCGAAUCUCUUAUAUCGCCUUUUGAGGUUAUUUUCUUAAUGCCCUCAAAAGACGGUAUUAGAGAUUACACAGCUGGACAAUCGUUGUUUGA
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Structure
        10        20          30        40        50     
UCAAGAGACAGUAUCUGAUAUCG--|      U      C         U    UU 
                         AAUCUCU AUAUCG CUUUUGAGG UAUU  \
                         UUAGAGA UAUGGC GAAAACUCC GUAA  C
AGUUUGUUGCUAACAGGUCGACACA^      U      A         C    UU 
 .       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Ad Ad Bl Ju La Pr
Mature sequence

Nve-Mir-2043-P1_5p
mirBase accessionMIMAT0009810
Sequence 
0- UAUAUCGCCUUUUGAGGUUAUU -22
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Star sequence

Nve-Mir-2043-P1_3p*
mirBase accessionMIMAT0009827
Sequence 
29- UGCCCUCAAAAGACGGUAUUAG -51
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