| MirGeneDB ID | Obi-Mir-1984-P4 |
| Family name |
MIR-1984 (all species) |
| Species |
California two-spot octopus (Octopus bimaculoides) |
| MiRBase ID |
|
| Paralogues |
Obi-Mir-1984-P3
|
| Orthologues |
Esc-Mir-1984
Lhy-Mir-1984
Npo-Mir-1984
Ovu-Mir-1984-P4
|
| Node of Origin (locus) |
Octopus
|
| Node of Origin (family) |
Conchifera
|
Genome context (PRJNA270931_OBI) |
KQ422643: 90945-91004 [+]
Ensembl
|
| Seed |
GCCCUAU |
Precursor (pre-Mir +30nt flank) |
UUGUUAUCGUUGUUACGGGUUUUUAUCAACUGCCCUAUACCCCAGUCACUGAGUGAUCAUUACUAUCAGUGACAAAGGUAUAGAGGUAGUUGAAUAUUACCGACGUCAACGGAGAUUAUC
Get precursor sequence
|
| Structure | 10 20 30 40 50
UUGUUAUCGUUGUUACG-- UUUUA -| CCA GUGAUC
GGU UCAACUGCC CUAUACC GUCACUGA \
CCA AGUUGAUGG GAUAUGG CAGUGACU A
CUAUUAGAGGCAACUGCAG UUAUA A^ AAA AUCAUU
. 110 100 90 80 70 60 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
No
|
| Motifs | CNNC at 3p(+17), UGUG in loop |
Tissue expression
|
|
| Mature sequence |
Obi-Mir-1984-P4_5p |
| mirBase accession | None |
| Sequence |
0- UGCCCUAUACCCCAGUCACUGA -22
Get sequence
|
| Star sequence |
Obi-Mir-1984-P4_3p* |
| mirBase accession | None |
| Sequence |
37- AGUGACAAAGGUAUAGAGGUAGU -60
Get sequence
|