MirGeneDB 3.0
MirGeneDB ID

Ocu-Mir-15-P2d

Family name MIR-15 (all species)
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-195
Paralogues Ocu-Mir-15-P1a  Ocu-Mir-15-P1b  Ocu-Mir-15-P1c  Ocu-Mir-15-P1d  Ocu-Mir-15-P2a  Ocu-Mir-15-P2b  Ocu-Mir-15-P2c 
Orthologues Aca-Mir-15-P2d  Ami-Mir-15-P2d  Bta-Mir-15-P2d  Cfa-Mir-15-P2d  Cin-Mir-15-P2  Cja-Mir-15-P2d  Cpo-Mir-15-P2d  Dno-Mir-15-P2d  Dre-Mir-15-P2d  Eca-Mir-15-P2d  Ete-Mir-15-P2d  Gja-Mir-15-P2d  Hsa-Mir-15-P2d  Laf-Mir-15-P2d  Loc-Mir-15-P2d  Mal-Mir-15-P2d  Mdo-Mir-15-P2d  Mml-Mir-15-P2d  Mmr-Mir-15-P2d  Mmu-Mir-15-P2d  Neu-Mir-15-P2d  Oan-Mir-15-P2d  Pab-Mir-15-P2d  Rno-Mir-15-P2d  Sha-Mir-15-P2d  Sto-Mir-15-P2d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(oryCun2_add)		 chr19: 12026542-12026602 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P2d)		 Mir-15-P1d chr19: 12026199-12026260 [+] UCSC Ensembl
Mir-15-P2d chr19: 12026542-12026602 [+] UCSC Ensembl
Seed AGCAGCA
Precursor
(pre-Mir +30nt flank)		 
UUUGUUGCCUACACCCAGCUCCCCUGGCUCUAGCAGCACAGAAAUAUUGGCACCGGGAGGCGAGUCUGCCAAUAUUGGCUGUGCUGCUCCAGGCGGGGUGGCGAGAGCUACUGGGAGGGGC
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Structure
        10          20        30        40         50         
UUUGUUGCCUACACCCA--  UC     G  CU          A-|         CCGGGA 
                   GC  CCCUG CU  AGCAGCACAG  AAUAUUGGCA      G
                   CG  GGGGC GA  UCGUCGUGUC  UUAUAACCGU      G
CGGGGAGGGUCAUCGAGAG  GU     G  CC          GG^         CUGAGC 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
He Ki Te To Wh
Mature sequence

Ocu-Mir-15-P2d_5p
mirBase accessionMIMAT0048309
Sequence 
0- UAGCAGCACAGAAAUAUUGGCA -22
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Star sequence

Ocu-Mir-15-P2d_3p*
mirBase accessionMIMAT0048310
Sequence 
38- CCAAUAUUGGCUGUGCUGCUCCA -61
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