Mir-374-P1

MirGeneDB ID

Ocu-Mir-374-P1

Family name

MIR-374 (all species)

Species

Rabbit (Oryctolagus cuniculus)

MiRBase ID

ocu-mir-374a

Paralogues

Ocu-Mir-374-P2

Orthologues

Bta-Mir-374-P1 Cfa-Mir-374-P1 Cja-Mir-374-P1 Cpo-Mir-374-P1 Dno-Mir-374-P1 Eca-Mir-374-P1 Hsa-Mir-374-P1 Mml-Mir-374-P1 Mmr-Mir-374-P1 Pab-Mir-374-P1

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(oryCun2_add)

chrUn0059: 1527643-1527694 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-374-P1)

Mir-374-P1 chrUn0059: 1527643-1527694 [+] UCSC Ensembl
Mir-421-P1-v1 chrUn0059: 1527804-1527864 [+] UCSC Ensembl
Mir-421-P1-v2 chrUn0059: 1527805-1527863 [+] UCSC Ensembl

Seed

UAUAAUA

Precursor
(pre-Mir +30nt flank)

CAGCCCCUGGAAAGCAAUUUACAUCGGCCAUUAUAAUACAACCUGAUAAGUGUUACAGCACUUACCAGAUUGUAUUGUAAUUGUCUGUGUAUAUGCCUGUCUGUCUUCCUGU

Get precursor sequence

Structure

        10          20        30        40        50     
CAGCCCCUGGAAAGCAAUU--|    C   C            C   A      UU 
                     UACAU GGC AUUAUAAUACAA CUG UAAGUG  A
                     AUGUG CUG UAAUGUUAUGUU GAC AUUCAC  C
UGUCCUUCUGUCUGUCCGUAU^    U   U            A   C      GA 
110       100        90        80        70        60