| MirGeneDB ID | Ocu-Mir-486 |
| Family name |
MIR-486 (all species) |
| Species |
Rabbit (Oryctolagus cuniculus) |
| MiRBase ID |
ocu-mir-486
|
| Paralogues |
|
| Orthologues |
Bta-Mir-486
Cfa-Mir-486
Cja-Mir-486
Cpo-Mir-486
Dno-Mir-486
Eca-Mir-486
Ete-Mir-486
Hsa-Mir-486
Laf-Mir-486
Mml-Mir-486
Mml-Mir-486-as
Mmr-Mir-486
Mmu-Mir-486
Pab-Mir-486
Rno-Mir-486
|
| Node of Origin (locus) |
Eutheria
|
| Node of Origin (family) |
Eutheria
|
Genome context (oryCun2_add) |
chrUn0008: 1523816-1523879 [+]
UCSC
Ensembl
|
| Seed |
CCUGUAC |
Precursor (pre-Mir +30nt flank) |
GCUCUGACCAUCUCCGCCCUCCCUGAGGGACCCUGUACUGAGCUGCCCUGAGGCCCUUGCCUGCGCCCAGCUCGGGGCGGCUCAGUCCAGGAUGCAUCGGGGUGGGAGUCAGCGGGAAUGGAGG
Get precursor sequence
|
| Structure | 10 20 30 40 50 60
GCUCUGACCAUCUCCGC--| U GGGAC U GCCCUUGC
CC CCCUGA CCUG ACUGAGCUGCCCUGAG C
GG GGGGCU GGAC UGACUCGGCGGGGCUC U
GGAGGUAAGGGCGACUGAG^ U ACGUA C GACCCGCG
120 110 100 90 80 70 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
No
|
| Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
| Mature sequence |
Ocu-Mir-486_5p |
| mirBase accession | MIMAT0048469 |
| Sequence |
0- CCCUGUACUGAGCUGCCCUGAG -22
Get sequence
|
| Star sequence |
Ocu-Mir-486_3p* |
| mirBase accession | MIMAT0048470 |
| Sequence |
43- GGGGCGGCUCAGUCCAGGAUG -64
Get sequence
|