MirGeneDB 3.0
MirGeneDB ID

Ovu-Mir-12566-P1

Family name MIR-12566 (all species)
Species Common octopus (Octopus vulgaris)
MiRBase ID
Paralogues Ovu-Mir-12566-P2  Ovu-Mir-12566-P3 
Orthologues Obi-Mir-12566-P1 
Node of Origin (locus) Octopus
Node of Origin (family) Octopus
Genome context
(GCA_003957725.1_ASM395772v1_OVU)		 RXHP01027681.1: 321400-321459 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-12566-P1)		 Mir-12566-P1 RXHP01027681.1: 321400-321459 [+] Ensembl
Mir-12566-P2 RXHP01027681.1: 324639-324697 [+] Ensembl
Mir-12566-P3 RXHP01027681.1: 325766-325826 [+] Ensembl
Seed UAAAUGC
Precursor
(pre-Mir +30nt flank)		 
UGCUGGUUCAAUAUUCUGAGUAAGAAGGCUUGUGUUUCUUGAUGCAUUCCACAGUUUAUUAUAUACUUUAAAUGCACCAAGAAUCACGAUUCUUCUGGCUCCCUUCAUCACUGAACAUAA
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Structure
        10          20        30        40        50          
UGCUGGUUCAAUAUUCU--|   A     GC     U      A      CCAC  UUUAU 
                   GAGU AGAAG  UUGUG UUCUUG UGCAUU    AG     \
                   CUCG UCUUC  AGCAC AAGAAC ACGUAA    UC     U
AAUACAAGUCACUACUUCC^   G     UU     U      C      AUU-  AUAUA 
.       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Ax Ce Fr He In Op Op Pe Po Re Sk St Su Su Te Ve Vi Wh
Star sequence

Ovu-Mir-12566-P1_5p*
mirBase accessionNone
Sequence 
0- UGUGUUUCUUGAUGCAUUCCACAG -24
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Mature sequence

Ovu-Mir-12566-P1_3p
mirBase accessionNone
Sequence 
37- UUAAAUGCACCAAGAAUCACGAU -60
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