| MirGeneDB ID | Pfl-Mir-4831 |
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| Family name |
MIR-4831 (all species) |
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| Species |
Ptychodera (Ptychodera flava) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Sko-Mir-4831
|
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| Node of Origin (locus) |
Enteropneusta
|
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| Node of Origin (family) |
Enteropneusta
|
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Genome context
(Pfl) |
LD352251.1: 81024-81083 [+]
|
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| Seed |
UCGGCAA |
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Precursor
(pre-Mir +30nt flank) |
UCCUUGAGCUUGGCGUUGUUCCAGGUGUUGGCAGGGUAUGUUUUGCUGUAAAUGAGAGUUACACUAUUUCGGCAAAAUGUACUCUUGCAAACAACUGGGAUCUCGAGCAUCAAUCCAAUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCCUUGAGCUUGGCGUU-- G G -| U GAGAG
GUUCCAG UGUU GCAGG GUAUGUUUUGCUG AAAU U
UAGGGUC ACAA CGUUC CAUGUAAAACGGC UUUA U
CUAACCUAACUACGAGCUC A A U^ - UCACA
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Pfl-Mir-4831_5p* |
| mirBase accession | None |
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| Sequence |
0- GCAGGGUAUGUUUUGCUGUAAAU -23
Get sequence
|
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| Mature sequence |
Pfl-Mir-4831_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UUCGGCAAAAUGUACUCUUGCAA -60
Get sequence
|
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