MirGeneDB 3.0
47 microRNA genes with node of origin Enteropneusta
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Pfl-Mir-193-P1c None MIR-193 ACUGGCC None None LD349275.1 115030 115089 + Enteropneusta Bilateria No 1 1 1
Sko-Mir-193-P1c sko-mir-193a MIR-193 GGGAUUU MIMAT0019157 MIMAT0009635 NW_003119955.1 7658 7714 + Enteropneusta Bilateria No 1
Pfl-Mir-193-P1d None MIR-193 ACUGGCC None None LD349275.1 115517 115576 + Enteropneusta Bilateria No 1 1
Sko-Mir-193-P1d sko-mir-193b MIR-193 ACUGGCC None MIMAT0009677 NW_003119955.1 7997 8058 + Enteropneusta Bilateria No 1 1
Pfl-Mir-4818-P1 None MIR-4818 UUGCACU None None LD345931.1 65685 65745 - Enteropneusta Enteropneusta No 1 1 1
Sko-Mir-4818-P1 sko-mir-4818a MIR-4818 UUGCACU None MIMAT0020009 NW_003137342.1 65108 65168 - Enteropneusta Enteropneusta No
Pfl-Mir-4818-P2 None MIR-4818 AUUGCAC None None LD345931.1 65538 65597 - Enteropneusta Enteropneusta No 1
Sko-Mir-4818-P2 sko-mir-4818d MIR-4818 AUUGCAC None MIMAT0020013 NW_003137342.1 64676 64736 - Enteropneusta Enteropneusta No 1
Pfl-Mir-4818-P3 None MIR-4818 AUUGCAC None None LD345931.1 65230 65289 - Enteropneusta Enteropneusta No 1 1
Sko-Mir-4818-P3 sko-mir-4818g MIR-4818 AUUGCAC MIMAT0020017 MIMAT0020018 NW_003137342.1 64550 64608 - Enteropneusta Enteropneusta No 1 1
Pfl-Mir-4818-P4 None MIR-4818 AUUGCAC None None LD345931.1 65041 65101 - Enteropneusta Enteropneusta No 1 1
Sko-Mir-4818-P4 sko-mir-4818b MIR-4818 AUUGCAC MIMAT0020010 MIMAT0020011 NW_003137342.1 64360 64419 - Enteropneusta Enteropneusta No 1
Pfl-Mir-4818-P5 None MIR-4818 AUUGCAC None None LD345931.1 60244 60301 - Enteropneusta Enteropneusta No 1
Sko-Mir-4818-P5 sko-mir-4818e MIR-4818 AUUGCAC MIMAT0020014 MIMAT0020015 NW_003137342.1 63417 63475 - Enteropneusta Enteropneusta No 1 1
Pfl-Mir-4818-P6 None MIR-4818 AUUGCAC None None LD345931.1 60006 60068 - Enteropneusta Enteropneusta No 1 1 1
Sko-Mir-4818-P6 sko-mir-4818f MIR-4818 AUUGCAC None MIMAT0020016 NW_003137342.1 63315 63374 - Enteropneusta Enteropneusta No 1
Pfl-Mir-4819 None MIR-4819 CUUGGAC None None LD344947.1 75194 75252 + Enteropneusta Enteropneusta No
Sko-Mir-4819 sko-mir-4819 MIR-4819 CUUGGAC MIMAT0020019 MIMAT0020020 NW_003105607.1 246707 246763 + Enteropneusta Enteropneusta No
Pfl-Mir-4820 None MIR-4820 GAGCUUC None None LD343718.1 81400 81463 + Enteropneusta Enteropneusta No 1 1
Sko-Mir-4820 sko-mir-4820 MIR-4820 GAGCUUC None MIMAT0020021 NW_003124899.1 533439 533498 + Enteropneusta Enteropneusta No 1
Pfl-Mir-4824 None MIR-4824 AACUUAC None None LD357736.1 49417 49479 - Enteropneusta Enteropneusta Unknown 1
Sko-Mir-4824 sko-mir-4824 MIR-4824 AACUUAC MIMAT0020029 None NW_003135336.1 702311 702373 - Enteropneusta Enteropneusta Unknown 1
Sko-Mir-4825 sko-mir-4825 MIR-4825 CACACCU MIMAT0020030 MIMAT0020031 NW_003129871.1 130747 130808 - Enteropneusta Enteropneusta Yes 1 1
Pfl-Mir-4826 None MIR-4826 AUCCGAU None None LD343550.1 44743 44809 - Enteropneusta Enteropneusta No 1
Sko-Mir-4826 sko-mir-4826 MIR-4826 AUCCGAU MIMAT0020032 MIMAT0020033 NW_003111485.1 19771 19832 + Enteropneusta Enteropneusta No 1
Pfl-Mir-4828-P1 None MIR-4828 GUAAAUA None None LD343010.1 765739 765802 - Enteropneusta Enteropneusta No 1 1
Sko-Mir-4828-P1 sko-mir-4828a MIR-4828 GUAAAUA None MIMAT0020036 NW_003123408.1 368928 368991 - Enteropneusta Enteropneusta No 1 1
Pfl-Mir-4828-P2 None MIR-4828 GUAAAUG None None LD343010.1 765581 765644 - Enteropneusta Enteropneusta No 1 1
Sko-Mir-4828-P2 None MIR-4828 GUAAAUG None None NW_003123408.1 368810 368871 - Enteropneusta Enteropneusta No 1 1 1
Pfl-Mir-4828-P3 None MIR-4828 GUAAAUG None None LD343010.1 765387 765446 - Enteropneusta Enteropneusta No 1 1 1
Sko-Mir-4828-P3 sko-mir-4828b MIR-4828 GUAAAUG None MIMAT0020037 NW_003123408.1 368589 368648 - Enteropneusta Enteropneusta No 1 1
Pfl-Mir-4828-P4 None MIR-4828 GUAAAUA None None LD343010.1 765234 765296 - Enteropneusta Enteropneusta No 1
Sko-Mir-4828-P4 None MIR-4828 GUAAAUA None None NW_003123408.1 368417 368477 - Enteropneusta Enteropneusta No 1
Pfl-Mir-4829-P1 None MIR-4829 GUACUCU None None LD533351.1 109641 109700 + Enteropneusta Enteropneusta No 1
Sko-Mir-4829-P1 sko-mir-4829b MIR-4829 GUACUCU None MIMAT0020039 NW_003105101.1 415937 415996 - Enteropneusta Enteropneusta No 1
Pfl-Mir-4829-P2 None MIR-4829 GUACUCU None None LD533351.1 109846 109914 + Enteropneusta Enteropneusta No 1
Sko-Mir-4829-P2 sko-mir-4829a MIR-4829 GUACUCU None MIMAT0020038 NW_003105101.1 415704 415768 - Enteropneusta Enteropneusta No 1
Pfl-Mir-4829-P3 None MIR-4829 GUACUUU None None LD533351.1 110032 110091 + Enteropneusta Enteropneusta No 1
Sko-Mir-4829-P3 sko-mir-4829c MIR-4829 GUACUUU None MIMAT0020040 NW_003105101.1 415480 415541 - Enteropneusta Enteropneusta No 1
Pfl-Mir-4831 None MIR-4831 UCGGCAA None None LD352251.1 81024 81083 + Enteropneusta Enteropneusta No 1 1
Sko-Mir-4831 sko-mir-4831 MIR-4831 UCGGCAA None MIMAT0020045 NW_003120434.1 28404 28464 - Enteropneusta Enteropneusta No
Pfl-Mir-4835 None MIR-4835 CAAGCAG None None LD349453.1 152990 153050 - Enteropneusta Enteropneusta No 1
Sko-Mir-4835 sko-mir-4835 MIR-4835 CAAGCAG MIMAT0020051 MIMAT0020052 NW_003137830.1 154894 154952 - Enteropneusta Enteropneusta No 1 1 1
Pfl-Mir-4838 None MIR-4838 GCUCCUG None None LD527542.1 213535 213594 + Enteropneusta Enteropneusta No 1
Sko-Mir-4838 sko-mir-4838 MIR-4838 GCUCCUG None MIMAT0020058 NW_003151253.1 407594 407654 - Enteropneusta Enteropneusta No
Pfl-Mir-4839 None MIR-4839 AAGUUUU None None LD346064.1 153036 153094 - Enteropneusta Enteropneusta Unknown
Sko-Mir-4839 sko-mir-4839 MIR-4839 AAGUUUU MIMAT0020059 None NW_003107598.1 182979 183037 - Enteropneusta Enteropneusta Unknown

(red - mature/co-mature, blue - star)

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