| MirGeneDB ID | Rno-Mir-3112 |
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| Family name |
MIR-3112 (all species) |
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| Species |
Norway rat (Rattus norvegicus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Mmu-Mir-3112
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| Node of Origin (locus) |
Muridae
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| Node of Origin (family) |
Muridae
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Genome context
(rn6) |
chrX: 104898922-104898979 [+]
UCSC
Ensembl
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| Seed |
CAUAGAA |
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Precursor
(pre-Mir +30nt flank) |
AUUGUCAUUAUAGCAUCUAAAUGAACAGUGACAUAGAAAAGACAGUCUGCAUAUGAUUCUGGAGCUGUAGUCUGUCUCUUCUCUGUCAUUGUGGCUUGCUUUGCUCCAGCUGUGCCUA
Get precursor sequence
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| Structure | 10 20 30 40 50
AUUGUCAUUAUAGCAUCUAAAUGA--| U A U UAUGAU
ACAGUGACA AGAA AGACAG CUGCA U
UGUUACUGU UCUU UCUGUC GAUGU C
AUCCGUGUCGACCUCGUUUCGUUCGG^ C C U CGAGGU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Dr |
Dr |
Ad |
Bi |
Bi |
Bi |
Bi |
Br |
Br |
Br |
Br |
Ce |
Ce |
Ce |
Ce |
Co |
Co |
Co |
Co |
Du |
Du |
Du |
Du |
Fa |
He |
He |
He |
Hi |
Hi |
Il |
Il |
Je |
Je |
Ki |
Ki |
Ki |
Ki |
Ki |
La |
Li |
Li |
Li |
Li |
Li |
Li |
Lu |
Me |
Me |
Mu |
Ov |
Pa |
Pa |
Pa |
Sk |
Sm |
So |
So |
So |
So |
Sp |
St |
St |
St |
St |
Te |
Te |
Th |
Ut |
Wh |
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| Mature sequence |
Rno-Mir-3112_5p (predicted) |
| mirBase accession | None |
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| Sequence |
0- ACAUAGAAAAGACAGUCUGCA -21
Get sequence
|
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| Star sequence |
Rno-Mir-3112_3p* |
| mirBase accession | None |
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| Sequence |
37- UAGUCUGUCUCUUCUCUGUCA -58
Get sequence
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