MirGeneDB 3.0
67 microRNA genes with node of origin Muridae
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Mmu-Mir-298 mmu-mir-298 MIR-298 GCAGAGG MIMAT0000376 MIMAT0017007 chr2 174267511 174267575 - Muridae Muridae No 1
Rno-Mir-298 rno-mir-298 MIR-298 GCAGAGG MIMAT0000900 MIMAT0017166 chr3 172357950 172358014 - Muridae Muridae No
Mmu-Mir-351 mmu-mir-351 MIR-351 CCCUGAG MIMAT0000609 MIMAT0017042 chrX 53053276 53053338 - Muridae Muridae No 1
Mmu-Mir-430-P5a mmu-mir-290a MIR-430 CUCAAAC MIMAT0000366 MIMAT0004572 chr7 3218639 3218697 + Muridae Vertebrata No 1
Rno-Mir-430-P5a rno-mir-290 MIR-430 CUCAAAC MIMAT0000893 None chr1 64538716 64538773 - Muridae Vertebrata No 1 1
Mmu-Mir-430-P5b mmu-mir-292a MIR-430 AAGUGCC MIMAT0000369 MIMAT0000370 chr7 3219200 3219261 + Muridae Vertebrata No
Rno-Mir-430-P5b rno-mir-292 MIR-430 AAGUGCC MIMAT0000896 MIMAT0000897 chr1 64538128 64538189 - Muridae Vertebrata No 1
Mmu-Mir-430-P5c mmu-mir-293 MIR-430 GUGCCGC MIMAT0004573 MIMAT0000371 chr7 3220356 3220411 + Muridae Vertebrata No
Rno-Mir-430-P5c rno-mir-293 MIR-430 GUGCCGC MIMAT0012847 MIMAT0017365 chr1 64537114 64537171 - Muridae Vertebrata No 1
Mmu-Mir-430-P7a mmu-mir-291a MIR-430 AUCAAAG MIMAT0000367 MIMAT0000368 chr7 3218932 3218989 + Muridae Vertebrata No 1
Rno-Mir-430-P7a rno-mir-291a MIR-430 AUCAAAG MIMAT0000894 MIMAT0000895 chr1 64538418 64538475 - Muridae Vertebrata No 1
Mmu-Mir-430-P7b mmu-mir-291b MIR-430 AUCAAAG MIMAT0003189 MIMAT0003190 chr7 3219494 3219550 + Muridae Vertebrata No 1
Rno-Mir-430-P7b rno-mir-291b MIR-430 AUCAAAG None MIMAT0017822 chr1 64537854 64537910 - Muridae Vertebrata No 1 1
Mmu-Mir-430-P7c mmu-mir-294 MIR-430 AAGUGCU MIMAT0004574 MIMAT0000372 chr7 3220655 3220712 + Muridae Vertebrata No 1
Rno-Mir-430-P7c rno-mir-294 MIR-430 AAGUGCU MIMAT0012848 None chr1 64536751 64536808 - Muridae Vertebrata No 1
Mmu-Mir-434 mmu-mir-434 MIR-434 UUGAACC MIMAT0001421 MIMAT0001422 chr12 109594527 109594586 + Muridae Muridae No 1
Rno-Mir-434 rno-mir-434-1 MIR-434 UUGAACC MIMAT0017307 MIMAT0005315 None None None None Muridae Muridae No
Rno-Mir-506-P11 rno-mir-465 MIR-506 AUUUAGA MIMAT0012850 MIMAT0017367 chrX 151297377 151297433 - Muridae Eutheria No 1 1
Mmu-Mir-506-P13 mmu-mir-871 MIR-506 GACUGGC MIMAT0004841 MIMAT0017265 chrX 66810438 66810494 - Muridae Eutheria No 1 1
Rno-Mir-506-P13 rno-mir-871 MIR-506 GACUGGC MIMAT0005281 MIMAT0017289 chrX 151287797 151287853 - Muridae Eutheria No 1 1
Mmu-Mir-506-P14 mmu-mir-881 MIR-506 ACUGUGU MIMAT0004845 MIMAT0004846 chrX 66801954 66802011 - Muridae Eutheria No 1 1
Rno-Mir-506-P14 rno-mir-881 MIR-506 ACUGUGG MIMAT0017293 MIMAT0005289 chrX 151283920 151283976 - Muridae Eutheria No 1 1
Mmu-Mir-506-P15 mmu-mir-878 MIR-506 AUCUAGU MIMAT0004932 MIMAT0004933 chrX 66801518 66801575 - Muridae Eutheria No 1 1 1
Rno-Mir-506-P15 rno-mir-878 MIR-506 AUCUAGU None MIMAT0005286 chrX 151283471 151283527 - Muridae Eutheria No 1 1 1
Mmu-Mir-506-P16 mmu-mir-880 MIR-506 ACUCCAU MIMAT0017266 MIMAT0004844 chrX 66800540 66800597 - Muridae Eutheria No 1 1
Rno-Mir-506-P16 rno-mir-880 MIR-506 ACUCCAU MIMAT0017292 MIMAT0005288 chrX 151281998 151282055 - Muridae Eutheria No 1 1
Mmu-Mir-506-P17 mmu-mir-463 MIR-506 ACCUAAU MIMAT0002104 MIMAT0004758 chrX 66799235 66799294 - Muridae Eutheria No 1 1
Rno-Mir-506-P17 rno-mir-463 MIR-506 ACCUAAU MIMAT0017309 MIMAT0005317 chrX 151276038 151276097 - Muridae Eutheria No 1
Mmu-Mir-506-P18 mmu-mir-741 MIR-506 GAGAGAU MIMAT0017262 MIMAT0004236 chrX 66796809 66796869 - Muridae Eutheria No 1
Rno-Mir-506-P18 rno-mir-741 MIR-506 GAAAGAU MIMAT0017901 MIMAT0017902 chrX 151274374 151274430 - Muridae Eutheria No 1
Mmu-Mir-506-P19 mmu-mir-471 MIR-506 ACGUAGU MIMAT0002112 MIMAT0017195 chrX 66792598 66792655 - Muridae Eutheria No 1 1
Rno-Mir-506-P19 rno-mir-471 MIR-506 ACGUAGU MIMAT0005318 MIMAT0017310 chrX 151272114 151272171 - Muridae Eutheria No 1 1
Mmu-Mir-506-P21 mmu-mir-883a MIR-506 AACUGCA MIMAT0004848 MIMAT0004849 chrX 66780767 66780824 - Muridae Eutheria No
Rno-Mir-506-P21 rno-mir-883 MIR-506 AACUGCA MIMAT0017294 MIMAT0005290 chrX 151260712 151260770 - Muridae Eutheria No
Mmu-Mir-506-P22 mmu-mir-742 MIR-506 AAAGCCA MIMAT0004838 MIMAT0004237 chrX 66780376 66780432 - Muridae Eutheria No 1 1
Rno-Mir-506-P22 rno-mir-742 MIR-506 AAAGCCA MIMAT0017314 MIMAT0005333 chrX 151260323 151260379 - Muridae Eutheria No 1 1
Mmu-Mir-506-P23 mmu-mir-743b MIR-506 AAGACAU MIMAT0004839 MIMAT0004840 chrX 66777266 66777322 - Muridae Eutheria No 1 1
Rno-Mir-506-P23 rno-mir-743b MIR-506 AAGACAC MIMAT0017288 MIMAT0005280 chrX 151253328 151253384 - Muridae Eutheria No 1
Mmu-Mir-506-P24 mmu-mir-743a MIR-506 AAGACAC MIMAT0017263 MIMAT0004238 chrX 66776760 66776815 - Muridae Eutheria No 1 1
Rno-Mir-506-P24 rno-mir-743a MIR-506 AAGACGC MIMAT0017315 MIMAT0005334 chrX 151252838 151252893 - Muridae Eutheria No 1
Mmu-Mir-540 mmu-mir-540 MIR-540 GGUCAGA MIMAT0004786 MIMAT0003167 chr12 109586085 109586143 + Muridae Muridae No 1
Rno-Mir-540 rno-mir-540 MIR-540 GGUCAGA MIMAT0017211 MIMAT0003174 chr6 133706216 133706274 + Muridae Muridae No 1
Mmu-Mir-666 mmu-mir-666 MIR-666 GCGGGCA MIMAT0003737 MIMAT0004823 chr12 109717103 109717163 + Muridae Muridae No 1
Rno-Mir-666 rno-mir-666 MIR-666 GCUGCAG MIMAT0012855 MIMAT0017371 chr6 133866541 133866601 + Muridae Muridae No 1
Mmu-Mir-667 mmu-mir-667 MIR-667 GACACCU MIMAT0017239 MIMAT0003734 chr12 109720020 109720083 + Muridae Muridae No 1
Rno-Mir-667 rno-mir-667 MIR-667 GACACCU MIMAT0017369 MIMAT0012852 chr6 133869584 133869647 + Muridae Muridae No 1
Mmu-Mir-673 mmu-mir-673 MIR-673 UCACAGC MIMAT0003739 MIMAT0004824 chr12 109572004 109572066 + Muridae Muridae No 1 1
Rno-Mir-673 rno-mir-673 MIR-673 CCGGGAC MIMAT0005328 MIMAT0017313 chr6 133691391 133691453 + Muridae Muridae No 1
Mmu-Mir-674 mmu-mir-674 MIR-674 CACUGAG MIMAT0003740 MIMAT0003741 chr2 117185151 117185207 + Muridae Muridae No 1
Rno-Mir-674 rno-mir-674 MIR-674 ACAGCUC MIMAT0005329 MIMAT0005330 chr3 108864472 108864528 + Muridae Muridae No 1
Mmu-Mir-700 mmu-mir-700 MIR-700 AAGGCUC MIMAT0017256 MIMAT0003490 chr4 135416561 135416622 - Muridae Muridae No 1
Rno-Mir-700 None MIR-700 AAGGCUC None None chr5 153774001 153774062 - Muridae Muridae Unknown 1
Mmu-Mir-879 mmu-mir-879 MIR-879 GAGGCUU MIMAT0004842 MIMAT0004843 chr5 9375714 9375769 + Muridae Muridae No
Rno-Mir-879 rno-mir-879 MIR-879 GAGGCUU MIMAT0005287 MIMAT0017291 chr4 21673645 21673700 - Muridae Muridae No
Mmu-Mir-1955 mmu-mir-1955 MIR-1955 GUCCCAG MIMAT0009426 MIMAT0017348 chr2 92191994 92192056 + Muridae Muridae No
Rno-Mir-1955 None MIR-1955 GUCCCAG None None chr3 81106509 81106571 + Muridae Muridae Unknown
Mmu-Mir-1962 mmu-mir-1962 MIR-1962 GAGGCUG None MIMAT0009435 chr7 135566193 135566255 + Muridae Muridae No 1
Mmu-Mir-3068 mmu-mir-3068 MIR-3068 UGGAGUU MIMAT0014842 MIMAT0014843 chr12 87437685 87437747 - Muridae Muridae No
Rno-Mir-3068 rno-mir-3068 MIR-3068 UGGAGUU MIMAT0024845 MIMAT0024846 chr6 111468737 111468799 - Muridae Muridae No
Mmu-Mir-3072 mmu-mir-3072 MIR-3072 GCCCCCU MIMAT0014852 MIMAT0014853 chr12 109747893 109747949 + Muridae Muridae No
Rno-Mir-3072 rno-mir-3072 MIR-3072 GCCCCCU None MIMAT0025071 chr6 133898823 133898879 + Muridae Muridae No
Mmu-Mir-3075 mmu-mir-3075 MIR-3075 GUCUGGG MIMAT0014858 MIMAT0014859 chr14 25534451 25534511 + Muridae Muridae No
Rno-Mir-3075 rno-mir-3075 MIR-3075 GUCUGGG MIMAT0025057 None chr16 1822830 1822890 + Muridae Muridae No
Mmu-Mir-3099 mmu-mir-3099 MIR-3099 AGGCUAG MIMAT0014815 MIMAT0014816 chr7 6803600 6803659 + Muridae Muridae No 1
Rno-Mir-3099 rno-mir-3099 MIR-3099 AGGCUAG None MIMAT0025048 chr1 70136980 70137039 - Muridae Muridae No 1
Mmu-Mir-3112 mmu-mir-3112 MIR-3112 CAUAGAA MIMAT0014955 MIMAT0014956 chrX 134075330 134075386 + Muridae Muridae No 1
Rno-Mir-3112 None MIR-3112 CAUAGAA None None chrX 104898922 104898979 + Muridae Muridae Unknown 1

(red - mature/co-mature, blue - star)

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