| MirGeneDB ID | Rno-Mir-700 |
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| Family name |
MIR-700 (all species) |
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| Species |
Norway rat (Rattus norvegicus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Mmu-Mir-700
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| Node of Origin (locus) |
Muridae
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| Node of Origin (family) |
Muridae
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Genome context
(rn6) |
chr5: 153774001-153774062 [-]
UCSC
Ensembl
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| Seed |
AAGGCUC |
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Precursor
(pre-Mir +30nt flank) |
GAUAGAAGAAAUUAAUUUCUUCCCCUGCAGUAAGGCUCCUUCCUGUGCUUGCAGGGGAGAAAUACGAACUGCACGCAGGAACCGAGUCCACCCCCAGUGUGGUGGUGCACGUCUGUGAGAGC
Get precursor sequence
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| Structure | 10 20 30 40 50 60
GAUAGAAGAAAUUAAUUUCUU C-- CAGUAA C-| CU GGGGAGA
CC CUG GGCUC UUCCUGUG UGCA A
GG GAC CUGAG AAGGACGC ACGU A
CGAGAGUGUCUGCACGUGGU- UGU CCCCAC CC^ -- CAAGCAU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Dr |
Dr |
Ad |
Bi |
Bi |
Bi |
Bi |
Br |
Br |
Br |
Br |
Ce |
Ce |
Ce |
Ce |
Co |
Co |
Co |
Co |
Du |
Du |
Du |
Du |
Fa |
He |
He |
He |
Hi |
Hi |
Il |
Il |
Je |
Je |
Ki |
Ki |
Ki |
Ki |
Ki |
La |
Li |
Li |
Li |
Li |
Li |
Li |
Lu |
Me |
Me |
Mu |
Ov |
Pa |
Pa |
Pa |
Sk |
Sm |
So |
So |
So |
So |
Sp |
St |
St |
St |
St |
Te |
Te |
Th |
Ut |
Wh |
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| Mature sequence |
Rno-Mir-700_5p (predicted) |
| mirBase accession | None |
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| Sequence |
0- UAAGGCUCCUUCCUGUGCUUGCA -23
Get sequence
|
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| Co-mature sequence |
Rno-Mir-700_3p (predicted) |
| mirBase accession | None |
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| Sequence |
41- CACGCAGGAACCGAGUCCACC -62
Get sequence
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