MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-879

Family name MIR-879 (all species)
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-879
Paralogues
Orthologues Mmu-Mir-879 
Node of Origin (locus) Muridae
Node of Origin (family) Muridae
Genome context
(rn6)		 chr4: 21673645-21673700 [-] UCSC Ensembl
Seed GAGGCUU
Precursor
(pre-Mir +30nt flank)		 
CAGAGACUCACAAGACAAGUUUCUAGAUCCAGAGGCUUAUAGCUCUAAGCCUUGGAUAAAAGAGGCUUAUGGCUUCAAGCUUUCGGAGCUGGCGACUCACUGAUCUUCGUGGUCAA
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Structure
        10          20        30        40        50       
CAGAGACUCACAAGACA--|   U    A   AG      AU    C       UGGA 
                   AGUU CUAG UCC  AGGCUU  AGCU UAAGCCU    U
                   UCAG GGUC AGG  UUCGAA  UCGG AUUCGGA    A
AACUGGUGCUUCUAGUCAC^   C    G   CU      CU    U       GAAA 
    110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
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Mature sequence

Rno-Mir-879_5p
mirBase accessionMIMAT0005287
Sequence 
0- AGAGGCUUAUAGCUCUAAGCCU -22
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Proposed targets microrna.org: MIMAT0005287
TargetScanVert: rno-miR-879-5p
miRDB: MIMAT0005287
Star sequence

Rno-Mir-879_3p*
mirBase accessionMIMAT0017291
Sequence 
34- GCUUAUGGCUUCAAGCUUUCGG -56
Get sequence
Proposed targets TargetScanVert: rno-miR-879-3p
miRDB: MIMAT0017291