MirGeneDB 3.0
MirGeneDB ID

Tca-Mir-2-P7

Family name MIR-2 (all species)
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-11
Paralogues Tca-Mir-2-P1-v1  Tca-Mir-2-P2a  Tca-Mir-2-P2b  Tca-Mir-2-P3-v1  Tca-Mir-2-P4-v1  Tca-Mir-2-P5c  Tca-Mir-2-P5d  Tca-Mir-2-P5e  Tca-Mir-2-P8 
Orthologues Aae-Mir-2-P7  Aga-Mir-2-P7  Asu-Mir-2-o7a  Asu-Mir-2-o7b  Bge-Mir-2-P7  Dan-Mir-2-P7  Dlo-Mir-2-P7  Dme-Mir-2-P7  Dmo-Mir-2-P7  Dsi-Mir-2-P7  Dya-Mir-2-P7  Gpa-Mir-2-P7  Gsp-Mir-2  Hme-Mir-2-P7  Ple-Mir-2 
Node of Origin (locus) Neoptera
Node of Origin (family) Protostomia
Genome context
(Tcas5.2)		 LG5: 7197519-7197576 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P7)		 Mir-2-P7 LG5: 7197519-7197576 [+] Ensembl
Mir-29-P2h LG5: 7197706-7197758 [+] Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
CUAACAAACGCUUACAUUGUAAAUGCAUUCUGGGAUUCUGACUGUGACCUGUGUGUGUCUGAUUCACAUCACAGGCAGAGUUCUAGCUAUGCGUUUACAGCUUGCUUCUCAACUCCCA
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Structure
        10          20         30        40        50         
CUAACAAACGCUUACAU--           U-|          A      CC    UGUGU 
                   UGUAAAUGCAU  CUGGGAUUCUG CUGUGA  UGUG     \
                   ACAUUUGCGUA  GAUCUUGAGAC GACACU  ACAC     C
ACCCUCAACUCUUCGUUCG           UC^          G      --    UUAGU 
      110       100        90        80        70          60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Star sequence

Tca-Mir-2-P7_5p*
mirBase accessionMIMAT0018854
Sequence 
0- UGGGAUUCUGACUGUGACCUGUG -23
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Mature sequence

Tca-Mir-2-P7_3p
mirBase accessionMIMAT0018855
Sequence 
36- CAUCACAGGCAGAGUUCUAGCU -58
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