MirGeneDB 3.0
MirGeneDB ID

Tgu-Mir-1641

Family name MIR-1641 (all species)
Species Zebra finch (Taeniopygia guttata)
MiRBase ID tgu-mir-1641
Paralogues
Orthologues Ami-Mir-1641  Cli-Mir-1641  Gga-Mir-1641 
Node of Origin (locus) Archosauria
Node of Origin (family) Archosauria
Genome context
(TaeGut1_add)		 3: 90035665-90035723 [+] UCSC Ensembl
Seed GAGGAUU
Precursor
(pre-Mir +30nt flank)		 
GCAAUAACAACGUCGAUGCAGGGCAUUUCCUGAGGAUUAAUGACUGUCUGGGGUCAUCAUCUCCUCCCAGUUAGUUAUUAAUCUCCAGGAAAUACUCUGUGCCUUGAUCAUUAUUGCUU
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Structure
        10          20        30        40        50         
GCAAUAACAACGUCGAU--|     C        AG            U     GUCAUC 
                   GCAGGG AUUUCCUG  GAUUAAUGACUG CUGGG      \
                   UGUCUC UAAAGGAC  CUAAUUAUUGAU GACCC      A
UUCGUUAUUACUAGUUCCG^     A        CU            U     UCCUCU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
- +
Fe Fe Fe Fe Ma Ma Ma Ma
Mature sequence

Tgu-Mir-1641_5p
mirBase accessionMIMAT0025400
Sequence 
0- UGAGGAUUAAUGACUGUCUGGG -22
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Star sequence

Tgu-Mir-1641_3p* (predicted)
mirBase accessionNone
Sequence 
37- CAGUUAGUUAUUAAUCUCCAGG -59
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