MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-460-P2b

Family name MIR-460 (all species)
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID
Paralogues Tni-Mir-460-P1  Tni-Mir-460-P2a 
Orthologues Aca-Mir-460-P2  Ami-Mir-460-P2  Cli-Mir-460-P2  Cpi-Mir-460-P2  Dre-Mir-460-P2  Gga-Mir-460-P2  Gja-Mir-460-P2  Gmo-Mir-460-P2  Lch-Mir-460-P2  Loc-Mir-460-P2  Mal-Mir-460-P2  Mun-Mir-460-P2  Spt-Mir-460-P2  Tgu-Mir-460-P2  Xtr-Mir-460-P2 
Node of Origin (locus) T. nigroviridis
Node of Origin (family) Osteichthyes
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 Un_random: 36284986-36285045 [+] UCSC Ensembl
Seed CCUCAUU
Precursor
(pre-Mir +30nt flank)		 
GGCCCCCGCUGAGACCGGUGUGCGGCGGCCUCCUCAUUGUGCAUGCUGUGUGCGCUCCUGUGUCCCACACAGCGUCCUGCAAUGUGGAGGUCGAGGCACAAGCCGACGCCCCGCCCACGC
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Structure
        10          20        30        40         50         
GGCCCCCGCUGAGACCGG--     GG        U      GC-|         CGCUCC 
                    UGUGC  CGGCCUCC CAUUGU   AUGCUGUGUG      \
                    ACACG  GCUGGAGG GUAACG   UGCGACACAC      U
CGCACCCGCCCCGCAGCCGA     GA        U      UCC^         CCUGUG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
Sp Sp Sp To
Mature sequence

Tni-Mir-460-P2b_5p
mirBase accessionNone
Sequence 
0- UCCUCAUUGUGCAUGCUGUGUG -22
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Star sequence

Tni-Mir-460-P2b_3p* (predicted)
mirBase accessionNone
Sequence 
37- CACAGCGUCCUGCAAUGUGGAGG -60
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