MirGeneDB 3.0
MirGeneDB ID

Aca-Mir-1720

Family name MIR-1720 (all species)
Species Green anole lizard (Anolis carolinensis)
MiRBase ID
Paralogues
Orthologues Ami-Mir-1720  Cli-Mir-1720  Cpi-Mir-1720  Gga-Mir-1720  Gja-Mir-1720  Pbv-Mir-1720  Spt-Mir-1720  Tgu-Mir-1720 
Node of Origin (locus) Diapsida
Node of Origin (family) Diapsida
Genome context
(anoCar2)		 GL343844.1: 159378-159439 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-1720)		 Mir-1720 GL343844.1: 159378-159439 [-] UCSC Ensembl
Mir-7-P1 GL343844.1: 159580-159643 [-] UCSC Ensembl
Seed GAUCACC
Precursor
(pre-Mir +30nt flank)		 
CCGUGAGAUACCACCUAUCUUUCCUGUUUCUGAUCACCUCUAUUGUUGCUUUUGUGGGCACUCAAAGGAAAGCAAUGGGAGGGUCGGUCUGAAAUGCCUUUUCUCCGUCUGCCAAAAUGAUG
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Structure
        10        20          30         40        50        60
CCGUGAGAUACCACCUAUCUUUCCU--     U    -|  U  A UG        GUGGGC 
                           GUUUC GAUC ACC CU U  UUGCUUUU      A
                           UAAAG CUGG UGG GA G  AACGAAAG      C
GUAGUAAAACCGUCUGCCUCUUUUCCG     U    C^  -  G GU        GAAACU 
120       110       100        90         80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Sk Ta Ta To Wh
Mature sequence

Aca-Mir-1720_5p
mirBase accessionNone
Sequence 
0- UGAUCACCUCUAUUGUUGCUUUU -23
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Star sequence

Aca-Mir-1720_3p* (predicted)
mirBase accessionNone
Sequence 
39- AAGCAAUGGGAGGGUCGGUCUGA -62
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