MirGeneDB 3.0
MirGeneDB ID

Asu-Mir-2-o11d

Family name MIR-2 (all species)
Species Large roundworm (Ascaris suum)
MiRBase ID asu-mir-43e
Paralogues Asu-Mir-2-o6  Asu-Mir-2-o7a  Asu-Mir-2-o7b  Asu-Mir-2-o8  Asu-Mir-2-o9  Asu-Mir-2-o10  Asu-Mir-2-o11a  Asu-Mir-2-o11b  Asu-Mir-2-o11c  Asu-Mir-2-P11 
Orthologues Cbr-Mir-2-P11  Cel-Mir-2-P11  Gsp-Mir-2  Ple-Mir-2 
Node of Origin (locus) A.suum
Node of Origin (family) Protostomia
Genome context
(ASU_PRJNA80881_plustraces)		 Scaffold1765: 14913-14972 [+]
Clustered miRNAs
(< 50kb from Mir-2-o11d)		 Mir-2-o11a Scaffold1765: 14467-14524 [+]
Mir-279-o25 Scaffold1765: 14642-14699 [+]
Mir-2-o11d Scaffold1765: 14913-14972 [+]
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
CCAAAGAGCACUGAUGAUUUGCACAGCACGCGGUAGCAGAGGUGCUGCGAUACGCUGUGUAGUAUCAUAUCACAGUUCUUUGCUACCUCGUGCUUCGCAUUUAUACGUCUGGCUUCGCUG
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Structure
        10          20        30        40        50          
CCAAAGAGCACUGAUGAUU--|  AC      C           U    C    CGCUGUG 
                     UGC  AGCACG GGUAGCAGAGG GCUG GAUA       \
                     ACG  UCGUGC CCAUCGUUUCU UGAC CUAU       U
GUCGCUUCGGUCUGCAUAUUU^  CU      U           -    A    ACUAUGA 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ce Em Em Em Em Em Em Em Em Em Em La Ov Se Sp Te Zy
Star sequence

Asu-Mir-2-o11d_5p* (predicted)
mirBase accessionMIMAT0021435
Sequence 
0- CGGUAGCAGAGGUGCUGCGAUACG -24
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Mature sequence

Asu-Mir-2-o11d_3p
mirBase accessionMIMAT0021436
Sequence 
37- UAUCACAGUUCUUUGCUACCUCG -60
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