| MirGeneDB ID | Bge-Mir-316 |
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| Family name |
MIR-316 (all species) |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Aae-Mir-316
Aga-Mir-316
Dan-Mir-316
Dme-Mir-316
Dmo-Mir-316
Dsi-Mir-316
Dya-Mir-316
Gpa-Mir-316
Hme-Mir-316
Tca-Mir-316
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| Node of Origin (locus) |
Pancrustacea
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| Node of Origin (family) |
Pancrustacea
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Genome context
(Bger_2.0) |
KZ614922.1: 160984-161046 [-]
Ensembl
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| Seed |
GUCUUUU |
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Precursor
(pre-Mir +30nt flank) |
UUUGGAGAAGAGAGCAAAGGUCUGUGGAUGUGUCUUUUUCCGCUUUGCUGCCGCUGUUGUUUAGAGAUUCGACAGCAAAGUGGAAGAGGCCGAUUCAUGGGGCAAGAAUCUUCUGUUUCAUCU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UUUGGAGAAGAGAGCAAAGG--| G U C CUGUUGU
UCUGUGGAU UG CUUUUUCCGCUUUGCUG CG U
GGGUACUUA GC GGAGAAGGUGAAACGAC GC U
UCUACUUUGUCUUCUAAGAACG^ - C A UUAGAGA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Ad |
Co |
Co |
Di |
Di |
Eg |
Eg |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
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| Mature sequence |
Bge-Mir-316_5p |
| mirBase accession | None |
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| Sequence |
0- UGUCUUUUUCCGCUUUGCUGCCG -23
Get sequence
|
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| Star sequence |
Bge-Mir-316_3p* |
| mirBase accession | None |
|---|
| Sequence |
41- ACAGCAAAGUGGAAGAGGCCGA -63
Get sequence
|
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