MirGeneDB 3.0
MirGeneDB ID

Dmo-Mir-316

Family name MIR-316 (all species)
Species Fruit fly (Drosophila mojavensis)
MiRBase ID dmo-mir-316
Paralogues
Orthologues Aae-Mir-316  Aga-Mir-316  Bge-Mir-316  Dan-Mir-316  Dme-Mir-316  Dsi-Mir-316  Dya-Mir-316  Gpa-Mir-316  Hme-Mir-316  Tca-Mir-316 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Pancrustacea
Genome context
(Dmoj_caf1)		 scaffold_6680: 18891224-18891282 [+] Ensembl
Seed GUCUUUU
Precursor
(pre-Mir +30nt flank)		 
AUCGAUUUUUAUAUAAAGUUCUAGUCGAUUUGUCUUUUUCCGCUUACUGACGUUUUAUUGAACAACGGCAGGGAAGGGAAAAAGGCGUAUUUACUAUGAAUUAUUUCAACGAUAUAAAA
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Structure
        10         20         30        40         50         
AUCGAUUUUUAUAUAAA-    -|   C   U           G   A-   A  UUUUAU 
                  GUUC UAGU GAU UGUCUUUUUCC CUU  CUG CG      \
                  UAAG AUCA UUA GCGGAAAAAGG GAA  GAC GC      U
AAAAUAUAGCAACUUUAU    U^   U   U           -   GG   G  AACAAG 
       110       100        90        80         70        60
Deep sequencing
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CommentThere is a second Dicer cut +1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Em Fe Ma Ma
Mature sequence

Dmo-Mir-316_5p
mirBase accessionMIMAT0008627
Sequence 
0- UGUCUUUUUCCGCUUACUGACG -22
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Star sequence

Dmo-Mir-316_3p*
mirBase accessionNone
Sequence 
37- GCAGGGAAGGGAAAAAGGCGUA -59
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