MirGeneDB 3.0
MirGeneDB ID

Bla-Mir-135-P5

Family name MIR-135 (all species)
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues Bla-Mir-135-P6 
Orthologues Bfl-Mir-135-P5 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Chordata
Genome context
(BraLan2)		 Sc0000129: 103824-103881 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-135-P5)		 Mir-135-P5 Sc0000129: 103824-103881 [+] Ensembl
Mir-135-P6 Sc0000129: 104052-104110 [+] Ensembl
Seed AUGGCUU
Precursor
(pre-Mir +30nt flank)		 
UGAUAGAUAUUCCCUAUUCUGCCCGUGUCCAAUGGCUUUCAUCCUUUGUGAAUGUCUGAGCACAGUUCACAUCGAUGGGGGUUAUUGGUCAAGAGUAAGACUUGUGGCUCCGCUAUAG
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Structure
        10          20        30        40        50         
UGAUAGAUAUUCCCUAU-  -|  CCG  U         UU    CUU      UGUCUG 
                  UC UGC   UG CCAAUGGCU  CAUC   UGUGAA      \
                  AG AUG   AC GGUUAUUGG  GUAG   ACACUU      A
GAUAUCGCCUCGGUGUUC  A^  AGA  U         GG    CU-      GACACG 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
- +
Ad Ad Em Em Em Em
Mature sequence

Bla-Mir-135-P5_5p
mirBase accessionNone
Sequence 
0- AAUGGCUUUCAUCCUUUGUGAA -22
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Star sequence

Bla-Mir-135-P5_3p*
mirBase accessionNone
Sequence 
37- CACAUCGAUGGGGGUUAUUGG -58
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