MirGeneDB 3.0
MirGeneDB ID

Bla-Mir-2058

Family name MIR-2058 (all species)
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues
Orthologues Bfl-Mir-2058 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Branchiostoma
Genome context
(BraLan2)		 Sc0000110: 921563-921621 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-2058)		 Mir-2058 Sc0000110: 921563-921621 [-] Ensembl
Mir-2057 Sc0000110: 922534-922594 [-] Ensembl
Seed GAGAAGU
Precursor
(pre-Mir +30nt flank)		 
ACGGCGGAGAAAACAUGGAAGCCCGCUAAGUGAGAAGUAAGACUACCAUCCCGUGUGUGCUGUGCCGGGGUGGGGUCUUGCUUCUUCCUUAGCGGCUUUACAACACAACGAUGGACGGC
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Structure
        10           20        30        40        50         
ACGGCGGAGAAAACAUG---|     C      UG            A        UGUGU 
                    GAAGCC GCUAAG  AGAAGUAAGACU CCAUCCCG     G
                    UUUCGG CGAUUC  UCUUCGUUCUGG GGUGGGGC     C
CGGCAGGUAGCAACACAACA^     -      CU            -        CGUGU 
       110       100         90        80         70        60
Deep sequencing
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CommentThe 3' end of the 5p arm might be monouridylated.
3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
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Mature sequence

Bla-Mir-2058_5p
mirBase accessionNone
Sequence 
0- UGAGAAGUAAGACUACCAUCCCG -23
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Star sequence

Bla-Mir-2058_3p* (predicted)
mirBase accessionNone
Sequence 
37- GGGUGGGGUCUUGCUUCUUCCU -59
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