MirGeneDB 3.0
MirGeneDB ID

Cel-Mir-787

Family name MIR-787 (all species)
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-787
Paralogues
Orthologues Cbr-Mir-787 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(ce11)		 chrX: 11294724-11294783 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-787)		 Mir-787 chrX: 11294724-11294783 [+] UCSC Ensembl
Mir-254 chrX: 11333550-11333612 [-] UCSC Ensembl
Seed AAGCUCG
Precursor
(pre-Mir +30nt flank)		 
AGCUCGCAGAGCAGGAUGUAUCAGUGGACGAAAGAUACAUACGAUCUUACAUCUUCAAAAUGGUAUGUAAGCUCGUUUUAGUAUCUUUCGUCUCUGAUCACAUUCAAUUAAGGUAAUACA
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Structure
        10           20        30        40          50        
AGCUCGCAGAGCAGGAU--  -     U             AU--|   U      UCUUCA 
                   GU AUCAG GGACGAAAGAUAC    ACGA CUUACA      A
                   CA UAGUC UCUGCUUUCUAUG    UGCU GAAUGU      A
ACAUAAUGGAAUUAACUUA  C     -             AUUU^   C      AUGGUA 
.       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Da Ea Mi Wi Yo Yo
Star sequence

Cel-Mir-787_5p*
mirBase accessionMIMAT0020348
Sequence 
0- AAAGAUACAUACGAUCUUACA -21
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Mature sequence

Cel-Mir-787_3p
mirBase accessionMIMAT0004222
Sequence 
37- UAAGCUCGUUUUAGUAUCUUUCG -60
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Proposed targets microrna.org: MIMAT0004222
TargetScanWorm: cel-miR-787