| MirGeneDB ID | Cfa-Mir-296 |
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| Family name |
MIR-296 (all species) |
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| Species |
Dog (Canis familiaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Bta-Mir-296
Cja-Mir-296
Cpo-Mir-296
Dno-Mir-296
Eca-Mir-296
Hsa-Mir-296
Laf-Mir-296
Mml-Mir-296
Mmr-Mir-296
Mmu-Mir-296
Pab-Mir-296
Rno-Mir-296
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(canFam3_add) |
chr24: 43570199-43570253 [-]
UCSC
Ensembl
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| Seed |
GGGCACC |
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Precursor
(pre-Mir +30nt flank) |
GGUGAUAAUGAAGAUGAAGGGCUCUUCCGGAGGGCACCCCCCAAUCCUGUUGUGCUGGAUUCAGAGGGUUGGGUGGAGGCUUUCCUGAAGGGCUGGAGGAGCGCUGCGCCCACGG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GGUGAUAAUGAAGAUGAAG-- C AC -| GUUGUGC
GGCUCUUC GGAGGGC CC CCCAAUCCU U
UCGGGAAG CCUUUCG GG GGGUUGGGA G
GGCACCCGCGUCGCGAGGAGG U GA U^ GACUUAG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
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| Motifs | UGUG in loop |
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Tissue expression
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| An |
An |
An |
Bl |
Ce |
Co |
He |
Hi |
Hi |
Hy |
Ki |
Ki |
Li |
Lu |
Ov |
Sk |
Te |
Te |
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| Mature sequence |
Cfa-Mir-296_5p (predicted) |
| mirBase accession | None |
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| Sequence |
0- AGGGCACCCCCCAAUCCUGU -20
Get sequence
|
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| Star sequence |
Cfa-Mir-296_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
34- AGGGUUGGGUGGAGGCUUUCC -55
Get sequence
|
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