MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-1912

Family name MIR-1912 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1912  Cfa-Mir-1912  Cpo-Mir-1912  Eca-Mir-1912  Ete-Mir-1912  Hsa-Mir-1912  Laf-Mir-1912  Mml-Mir-1912  Mmr-Mir-1912  Mmu-Mir-1912  Ocu-Mir-1912  Pab-Mir-1912  Rno-Mir-1912 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021937.1: 106961435-106961489 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-1912)		 Mir-1912 CM021937.1: 106961435-106961489 [+] UCSC Ensembl
Mir-1264 CM021937.1: 106962473-106962535 [+] UCSC Ensembl
Seed ACCCAGA
Precursor
(pre-Mir +30nt flank)		 
CAUCACAACUGGACUUGGCUCUAGGAUGUGCUCAUUGCAUGAGCUGCGUACAUUAUUAUUCAAUACCCAGAACAUGCGGUGUGAACAUAAUAGAGAUUGAAAAACAUCCAGAAGA
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Structure
        10          20        30        40        50       
CAUCACAACUGGACUUGG--|    GG    GCU         AG   C   CAUUAU 
                    CUCUA  AUGU   CAUUGCAUG  CUG GUA      \
                    GAGAU  UACA   GUGGCGUAC  GAC CAU      U
AGAAGACCUACAAAAAGUUA^    AA    AGU         AA   C   AACUUA 
   110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
- +
To
Star sequence

Cja-Mir-1912_5p* (predicted)
mirBase accessionNone
Sequence 
0- CUCAUUGCAUGAGCUGCGUACA -22
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Mature sequence

Cja-Mir-1912_3p (predicted)
mirBase accessionNone
Sequence 
33- UACCCAGAACAUGCGGUGUGAA -55
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