MirGeneDB 3.0
MirGeneDB ID

Cmi-Novel-12

Family name CMI-NOVEL-12 (all species)
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) C. milii
Node of Origin (family) C. milii
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635923.1: 1695490-1695547 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Novel-12)		 Novel-23 KI635923.1: 1695488-1695545 [-] UCSC Ensembl
Novel-12 KI635923.1: 1695490-1695547 [+] UCSC Ensembl
Seed AGCGACU
Precursor
(pre-Mir +30nt flank)		 
UGGUGUGAGCCUGGAAGUUGCCCAUAUGGCAAGCGACUGAUCCCAUCUAUGUUGUUGAAUAUACACAUAGAUGAGAUUAGUUGCUUGCCAUAUGGGUAAGUUUUUCCCAGGUGGAGAA
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Structure
        10          20        30        40        50        
UGGUGUGAGCCUGGAAG--|                        C         UGUUG 
                   UUGCCCAUAUGGCAAGCGACUGAUC CAUCUAUGU     A
                   AAUGGGUAUACCGUUCGUUGAUUAG GUAGAUACA     A
AAGAGGUGGACCCUUUUUG^                        A         CAUAU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
- +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Mature sequence

Cmi-Novel-12_5p
mirBase accessionNone
Sequence 
0- AAGCGACUGAUCCCAUCUAUGU -22
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Co-mature sequence

Cmi-Novel-12_3p
mirBase accessionNone
Sequence 
36- AUAGAUGAGAUUAGUUGCUUGC -58
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