MirGeneDB 3.0
MirGeneDB ID

Cmi-Novel-23

Family name CMI-NOVEL-23 (all species)
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) C. milii
Node of Origin (family) C. milii
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635923.1: 1695488-1695545 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Novel-23)		 Novel-23 KI635923.1: 1695488-1695545 [-] UCSC Ensembl
Novel-12 KI635923.1: 1695490-1695547 [+] UCSC Ensembl
Seed AGCAACU
Precursor
(pre-Mir +30nt flank)		 
CUCCACCUGGGAAAAACUUACCCAUAUGGCAAGCAACUAAUCUCAUCUAUGUGUAUAUUCAACAACAUAGAUGGGAUCAGUCGCUUGCCAUAUGGGCAACUUCCAGGCUCACACCAGC
Get precursor sequence
Structure
        10        20          30        40        50        
CUCCACCUGGGAAAAACUUA--|             A   A             GUAUA 
                      CCCAUAUGGCAAGC ACU AUCUCAUCUAUGU     U
                      GGGUAUACCGUUCG UGA UAGGGUAGAUACA     U
CGACCACACUCGGACCUUCAAC^             C   C             ACAAC 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Mature sequence

Cmi-Novel-23_5p
mirBase accessionNone
Sequence 
0- AAGCAACUAAUCUCAUCUAUGU -22
Get sequence
Co-mature sequence

Cmi-Novel-23_3p
mirBase accessionNone
Sequence 
36- AUAGAUGGGAUCAGUCGCUUGC -58
Get sequence