MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-1264

Family name MIR-1264 (all species)
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-1264
Paralogues
Orthologues Bta-Mir-1264  Cfa-Mir-1264  Cja-Mir-1264  Eca-Mir-1264  Ete-Mir-1264  Hsa-Mir-1264  Laf-Mir-1264  Mml-Mir-1264  Mmr-Mir-1264  Mmu-Mir-1264  Ocu-Mir-1264  Pab-Mir-1264  Rno-Mir-1264 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_46: 5270718-5270780 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-1264)		 Mir-1264 scaffold_46: 5270718-5270780 [-] UCSC
Mir-1912 scaffold_46: 5271936-5271990 [-] UCSC
Seed AAGUCUU
Precursor
(pre-Mir +30nt flank)		 
CAUUGUGUUUCUUCAUGCCUGGCAUAUAGCAGGUCCUCAAUAAGUAUUUGUUGAAAAAAUAAAUGAAUCAACAAGUCUUAUUUGAGCACCUGUUAUGUGUAGGAUAAAAAACUACGACUCAGA
Get precursor sequence
Structure
        10           20        30        40         50        60 
CAUUGUGUUUCUUCAUG---|   G            C     -    U       GAAAAAAU 
                    CCUG CAUAUAGCAGGU CUCAA UAAG AUUUGUU        \
                    GGAU GUGUAUUGUCCA GAGUU AUUC UGAACAA        A
AGACUCAGCAUCAAAAAAUA^   -            C     U    -       CUAAGUAA 
 120       110       100         90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Star sequence

Cpo-Mir-1264_5p* (predicted)
mirBase accessionMIMAT0047409
Sequence 
0- AGGUCCUCAAUAAGUAUUUGUU -22
Get sequence
Mature sequence

Cpo-Mir-1264_3p
mirBase accessionMIMAT0047410
Sequence 
41- CAAGUCUUAUUUGAGCACCUGU -63
Get sequence