| MirGeneDB ID | Dgr-Mir-277-P21 |
|---|---|
| Family name | MIR-277 (all species) |
| Species | Dimorphilus gyrociliatus (Dimorphilus gyrociliatus) |
| MiRBase ID | |
| Paralogues | Dgr-Mir-277-P19 Dgr-Mir-277-P20 |
| Orthologues | Aae-Mir-277 Aga-Mir-277 Agr-Mir-277 Bge-Mir-277 Bko-Mir-277 Bpl-Mir-277 Cel-Mir-277 Dan-Mir-277 Dlo-Mir-277 Dma-Mir-277 Dme-Mir-277 Dmo-Mir-277 Dpu-Mir-277 Dsi-Mir-277 Dya-Mir-277 Eba-Mir-277 Efe-Mir-277 Esc-Mir-277 Gpa-Mir-277 Gsp-Mir-277 Hme-Mir-277 Hru-Mir-277 Isc-Mir-277 Lgi-Mir-277 Llo-Mir-277 Mgi-Mir-277 Mom-Mir-277 Npo-Mir-277 Obi-Mir-277 Ovu-Mir-277 Pau-Mir-277 Pca-Mir-277 Pcr-Mir-277 Pdu-Mir-277 Pve-Mir-277 Rph-Mir-277 Sne-Mir-277 Snu-Mir-277 Tca-Mir-277 Tur-Mir-277 War-Mir-277 |
| Node of Origin (locus) | D. gyrociliatus |
| Node of Origin (family) | Protostomia |
| Genome context (GCA_904063045.1_Dgyrociliatus) |
CAJFCJ010000011.1: 145433-145532 [+] |
| Clustered miRNAs (< 50kb from Mir-277-P21) |
Mir-277-P21
CAJFCJ010000011.1: 145433-145532 [+]
Mir-315-P2 CAJFCJ010000011.1: 180337-180397 [-] |
| Seed | AAAUGCA |
| Precursor (pre-Mir +30nt flank) |
CCGCAUUCUACGGACUGAGCGCCUACUCGACGCAUCAGAUUUUCGCGCAUUUGUUCAUAAUAUUUCUUUUCCUCAAAAAAACGAGGAAAAAAUUAUUUUUGAAUAGAAUAAAUGCACGAUCUGGUGUGGCGAGUGACGCUUGUUUACUACCUGCAUAUUUGet precursor sequence |
| Structure | 10 20 30 40 50 60 70 80 CCGCAUUCUACGGACUG---| CC A UUU C CAUAAUAUUUCUUUUCCUCAAAAAA AGCG UACUCG CGCAUCAGA UCG GCAUUUGUU \ UCGC GUGAGC GUGUGGUCU AGC CGUAAAUAA A UUUAUACGUCCAUCAUUUGU^ A- G --- A GAUAAGUUUUUAUUAAAAAAGGAGC . 150 140 130 120 110 100 90 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Dgr-Mir-277-P21_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CGCAUCAGAUUUUCGCGCAUUUGUU -25
Get sequence
|
| Mature sequence | Dgr-Mir-277-P21_3p (predicted) |
| mirBase accession | None |
| Sequence |
78- UAAAUGCACGAUCUGGUGUGGC -100
Get sequence
|
