MirGeneDB 3.0
MirGeneDB ID

Dmo-Mir-3-P3

Family name MIR-3 (all species)
Species Fruit fly (Drosophila mojavensis)
MiRBase ID dmo-mir-318
Paralogues Dmo-Mir-3-P1  Dmo-Mir-3-P2 
Orthologues Dan-Mir-3-P3  Dlo-Mir-3  Dma-Mir-3  Dme-Mir-3-P3  Dpu-Mir-3  Dsi-Mir-3-P3  Dya-Mir-3-P3  Gpa-Mir-3 
Node of Origin (locus) Drosophila
Node of Origin (family) Pancrustacea
Genome context
(Dmoj_caf1)		 scaffold_6540: 5225350-5225408 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-3-P3)		 Mir-9717 scaffold_6540: 5225063-5225119 [-] Ensembl
Mir-2-P9 scaffold_6540: 5225196-5225264 [+] Ensembl
Mir-3-P3 scaffold_6540: 5225350-5225408 [+] Ensembl
Seed CACUGGG
Precursor
(pre-Mir +30nt flank)		 
UUGAAAUGUGAUUAAGGAUUUCAAUUUAUGGGAUACACUAAGUUCAGUUUUGUCAGAUGUCCAAGCAUCACUGGGCUUUGUUUAUCUCAUAAGAGCGAAAUUUGUUCAACUUACGGGAC
Get precursor sequence
Structure
        10         20         30        40        50         
UUGAAAUGUGAUUAAGG-     AA-|          C  U         UU  UCAGAU 
                  AUUUC   UUUAUGGGAUA AC AAGUUCAGU  UG      \
                  UAAAG   GAAUACUCUAU UG UUCGGGUCA  AC      G
CAGGGCAUUCAACUUGUU     CGA^          U  U         CU  GAACCU 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Em Fe Ma Ma
Star sequence

Dmo-Mir-3-P3_5p* (predicted)
mirBase accessionNone
Sequence 
0- GGAUACACUAAGUUCAGUUUUG -22
Get sequence
Mature sequence

Dmo-Mir-3-P3_3p
mirBase accessionMIMAT0008684
Sequence 
37- UCACUGGGCUUUGUUUAUCUCA -59
Get sequence