| MirGeneDB ID | Dsi-Mir-970 |
| Family name |
MIR-970 (all species) |
| Species |
Fruit fly (Drosophila simulans) |
| MiRBase ID |
dsi-mir-970
|
| Paralogues |
|
| Orthologues |
Aae-Mir-970
Aga-Mir-970
Dan-Mir-970
Dme-Mir-970
Dmo-Mir-970
Dya-Mir-970
Gpa-Mir-970
Hme-Mir-970
Tca-Mir-970
|
| Node of Origin (locus) |
Aparaglossata
|
| Node of Origin (family) |
Aparaglossata
|
Genome context (Drosophila_simulans.ASM75419v3.dna.toplevel) |
X: 11875332-11875396 [+]
UCSC
Ensembl
|
| Seed |
CAUAAGA |
Precursor (pre-Mir +30nt flank) |
AAGUGAACGUAAUCGUAAGGCAUCUGUUGCAGCUAGCGGGUGUUUUAUUUGGUAGCUGAAUUGAUUUGAAUCUAUCAUAAGACACACGCGGCUAUAACCGAUGUCUAAAUGCUUCAAAUCGACAU
Get precursor sequence
|
| Structure | 10 20 30 40 50 60
AAGUGAACGUAAUCGUA--| U C A G UU GCUGAAUU
AGGCAUC GUUG AGCU GCG GUGUUUUA UGGUA G
UCUGUAG CAAU UCGG CGC CACAGAAU ACUAU A
UACAGCUAAACUUCGUAAA^ C A - A -- CUAAGUUU
120 110 100 90 80 70 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
No
|
| Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
| Star sequence |
Dsi-Mir-970_5p* |
| mirBase accession | MIMAT0012487 |
| Sequence |
0- AGCUAGCGGGUGUUUUAUUUGGUA -24
Get sequence
|
| Mature sequence |
Dsi-Mir-970_3p |
| mirBase accession | MIMAT0012488 |
| Sequence |
44- UCAUAAGACACACGCGGCUAU -65
Get sequence
|