| MirGeneDB ID | Gpa-Mir-970 |
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| Family name |
MIR-970 (all species) |
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| Species |
Tsetse fly (Glossina pallidipes) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Aae-Mir-970
Aga-Mir-970
Dan-Mir-970
Dme-Mir-970
Dmo-Mir-970
Dsi-Mir-970
Dya-Mir-970
Hme-Mir-970
Tca-Mir-970
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| Node of Origin (locus) |
Aparaglossata
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| Node of Origin (family) |
Aparaglossata
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Genome context
(GpalI1) |
Scaffold42: 273921-273989 [+]
Ensembl
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| Seed |
CAUAAGA |
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Precursor
(pre-Mir +30nt flank) |
AUGAGACACGAUAUCCAAGAGAUUUAUCAUAGCCAGCGUAUGUUUUAUUUGGUAGUUAAGGAACAUAUUAAUAUCCUAUCAUAAGACACACGCGGCUAUGGUCGAUUUCCACAUUUAACGAAACAACCA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AUGAGACACGAUAUCCAA--| U A A UU GUUAAGGAAC
GAGAUU AUCAUAGCC GCGU UGUUUUA UGGUA A
CUUUAG UGGUAUCGG CGCA ACAGAAU ACUAU U
ACCAACAAAGCAAUUUACAC^ C - C -- CCUAUAAUUA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Star sequence |
Gpa-Mir-970_5p* |
| mirBase accession | None |
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| Sequence |
0- AGCCAGCGUAUGUUUUAUUUGGUA -24
Get sequence
|
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| Mature sequence |
Gpa-Mir-970_3p |
| mirBase accession | None |
|---|
| Sequence |
48- UCAUAAGACACACGCGGCUAU -69
Get sequence
|
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