Mir-976

MirGeneDB ID

Dsi-Mir-976

Family name

MIR-976 (all species)

Species

Fruit fly (Drosophila simulans)

MiRBase ID

dsi-mir-976

Paralogues

Orthologues

Dan-Mir-976 Dme-Mir-976 Dmo-Mir-976 Dya-Mir-976

Node of Origin (locus)

Drosophila

Node of Origin (family)

Drosophila

Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)

X: 18330933-18330991 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-976)

Mir-972 X: 18322964-18323019 [+] UCSC Ensembl
Mir-9369 X: 18323144-18323204 [+] UCSC Ensembl
Mir-973 X: 18323323-18323387 [+] UCSC Ensembl
Mir-974 X: 18323461-18323522 [+] UCSC Ensembl
Mir-975 X: 18330806-18330866 [+] UCSC Ensembl
Mir-976 X: 18330933-18330991 [+] UCSC Ensembl
Mir-977 X: 18331071-18331133 [+] UCSC Ensembl
Mir-978-v1 X: 18333231-18333293 [+] UCSC Ensembl
Mir-978-v2 X: 18333232-18333292 [+] UCSC Ensembl

Seed

UUGGUGA

Precursor
(pre-Mir +30nt flank)

CACUGGAACCUCCGCAUGCAGUGUCGUGGCAUUGGUGAGGACAUCUCCAAUGGAUUGGUUCUCAUCAUUGGAUUAGUUAUCAUCAAUGCCGGUGCACUGCACUGCUGUCAACUUCGCGC

Get precursor sequence

Structure

        10          20        30        40        50         
CACUGGAACCUCCGCAU--|      CG            G   AUC       GAUUGG 
                   GCAGUGU  UGGCAUUGGUGA GAC   UCCAAUG      \
                   CGUCACG  GCCGUAACUACU UUG   AGGUUAC      U
CGCGCUUCAACUGUCGUCA^      UG            A   AUU       UACUCU 
       110       100        90        80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14)

Tissue expression

He	Wh

Mature sequence

Dsi-Mir-976_5p

mirBase accession

MIMAT0037357

Sequence

0- AUUGGUGAGGACAUCUCCAAUG -22

Get sequence

Star sequence

Dsi-Mir-976_3p*

mirBase accession

MIMAT0012502

Sequence

37- UUGGAUUAGUUAUCAUCAAUGC -59

Get sequence