MirGeneDB 3.0
MirGeneDB ID

Dya-Mir-1006

Family name MIR-1006 (all species)
Species Fruit fly (Drosophila yakuba)
MiRBase ID
Paralogues
Orthologues Dan-Mir-1006  Dme-Mir-1006  Dmo-Mir-1006  Dsi-Mir-1006 
Node of Origin (locus) Drosophila
Node of Origin (family) Drosophila
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)		 2R: 4378147-4378210 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-1006)		 Mir-1006 2R: 4378147-4378210 [+] UCSC Ensembl
Mir-9-P13 2R: 4404254-4404316 [-] UCSC Ensembl
Mir-9-P12-v1 2R: 4404435-4404497 [-] UCSC Ensembl
Mir-9-P12-v2 2R: 4404435-4404497 [-] UCSC Ensembl
Mir-306 2R: 4404575-4404633 [-] UCSC Ensembl
Mir-9-P11 2R: 4405087-4405156 [-] UCSC Ensembl
Seed AAAUUCG
Precursor
(pre-Mir +30nt flank)		 
CGUAUCCUGUCCACUCGUGUCAACUUCCAGGUGAGUUUGAAAUUGAAAUGCGUAAAUUGUUUGGUACAAUUUAAAUUCGAUUUCUUAUUCAUAGGUGCAAUACCAGUUGAUCUUCUGCCUGUGG
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Structure
        10                20        30        40        50        60 
CGUAUCCUGUCCACUCG--------|  CA    CCAG      UU         AUGCGUAAAUUGU 
                         UGU  ACUU    GUGAGU  GAAAUUGAA             U
                         ACG  UGGA    UACUUA  CUUUAGCUU             U
GGUGUCCGUCUUCUAGUUGACCAUA^  --    ----      UU         AAAUUUAACAUGG 
  120       110       100              90        80        70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
- +
He Wh
Star sequence

Dya-Mir-1006_5p*
mirBase accessionNone
Sequence 
0- GUGAGUUUGAAAUUGAAAUGCGUAAA -26
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Mature sequence

Dya-Mir-1006_3p
mirBase accessionNone
Sequence 
41- UAAAUUCGAUUUCUUAUUCAUAG -64
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