MirGeneDB 3.0
MirGeneDB ID

Dya-Mir-4969

Family name MIR-4969 (all species)
Species Fruit fly (Drosophila yakuba)
MiRBase ID
Paralogues
Orthologues Dme-Mir-4969  Dsi-Mir-4969 
Node of Origin (locus) D. melanogaster subgroup
Node of Origin (family) D. melanogaster subgroup
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)		 3R: 18444241-18444357 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-4969)		 Mir-999 3R: 18443963-18444022 [-] UCSC Ensembl
Mir-4969 3R: 18444241-18444357 [-] UCSC Ensembl
Seed GGUAAAU
Precursor
(pre-Mir +30nt flank)		 
AUAUAUAUAUGUAUGGAUUUUUCGGCGUGGCGGUAAAUUGAAUGAUGAGUGGGAGGAUGUCGCAGCCAUUGUUUGGCUGAUAAGGGAGCCUGGCGCACUAUUACCUGGCCCUCUGAAACGAGAGCCCACCUGUCAAUCAAUACCACCCCGCCGAACCGACAUCAUCAUAAUAAUCAU
Get precursor sequence
Structure
        10        20          30        40        50        60        70        80         
AUAUAUAUAUGUAUGGAUUU--|      U  C    AA    A    GA     AGGAUGUCGCAGCCAUUGUUUGGCUGAUAAGGGAG 
                      UUCGGCG GG GGUA  UUGA UGAU  GUGGG                                   \
                      AAGCCGC CC CCAU  AACU ACUG  CACCC                                   C
UACUAAUAAUACUACUACAGCC^      C  A    --    A    UC     GAGAGCAAAGUCUCCCGGUCCAUUAUCACGCGGUC 
     170       160       150         140       130       120       110       100        90
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
He Wh
Mature sequence

Dya-Mir-4969_5p
mirBase accessionNone
Sequence 
0- CGGUAAAUUGAAUGAUGAGUGGGA -24
Get sequence
Star sequence

Dya-Mir-4969_3p*
mirBase accessionNone
Sequence 
95- CCACCUGUCAAUCAAUACCACC -117
Get sequence