MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-194-o1

Family name MIR-194 (all species)
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues
Orthologues Laf-Mir-194-P1  Pma-Mir-194-o1 
Node of Origin (locus) Cyclostomata
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)		 FYBX02009777.1: 1718594-1718650 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-194-o1)		 Mir-192-o1 FYBX02009777.1: 1718365-1718423 [-] UCSC Ensembl
Mir-194-o1 FYBX02009777.1: 1718594-1718650 [-] UCSC Ensembl
Seed GUAACAG
Precursor
(pre-Mir +30nt flank)		 
UCACUUUGCAACACAACAGUGUGCAUCAGGUGUAACAGCAACUCCAUGUGGAUGGUUUAAAGCUCCCAGUGGAGUUACUGUUACUUUUGAUGGACAUUUCCGAACAAGUACCGACUA
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Structure
        10          20        30        40        50        
UCACUUUGCAACACAAC--|    G       U       C        GU   UGGUU 
                   AGUGU CAUCAGG GUAACAG AACUCCAU  GGA     \
                   UUACA GUAGUUU CAUUGUC UUGAGGUG  CCU     U
AUCAGCCAUGAACAAGCCU^    G       U       A        AC   CGAAA 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
To
Mature sequence

Ebu-Mir-194-o1_5p
mirBase accessionNone
Sequence 
0- UGUAACAGCAACUCCAUGUGGA -22
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Star sequence

Ebu-Mir-194-o1_3p*
mirBase accessionNone
Sequence 
35- CCAGUGGAGUUACUGUUACUUU -57
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