MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-194-P1

Family name MIR-194 (all species)
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-194-P2 
Orthologues Ebu-Mir-194-o1  Pma-Mir-194-o1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010101.1: 8120703-8120760 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-194-P1)		 Mir-192-P1 GL010101.1: 8120404-8120463 [-] UCSC Ensembl
Mir-194-P1 GL010101.1: 8120703-8120760 [-] UCSC Ensembl
Seed GUAACAG
Precursor
(pre-Mir +30nt flank)		 
UUUCAGGAAAAGCUUAAUGGAGUUAUCAAAUGUAACAGCAACUCCAUGUGGACCAGGUACCGACUUCCAGUGGGGAUGCUGUUACUUUUGAUGGCUACCAAUGAGCUACAACGCAAAG
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Structure
        10         20         30        40        50         
UUUCAGGAAAAGCUUAA-   -|         U         A      G    CCAGGU 
                  UGG AGUUAUCAAA GUAACAGCA CUCCAU UGGA      \
                  ACC UCGGUAGUUU CAUUGUCGU GGGGUG ACCU      A
GAAACGCAACAUCGAGUA   A^         U         A      -    UCAGCC 
      110       100        90        80        70         60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
Wh
Mature sequence

Laf-Mir-194-P1_5p
mirBase accessionNone
Sequence 
0- UGUAACAGCAACUCCAUGUGGAC -23
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Star sequence

Laf-Mir-194-P1_3p* (predicted)
mirBase accessionNone
Sequence 
36- CCAGUGGGGAUGCUGUUACUUU -58
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