MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-30-P1f

Family name MIR-30 (all species)
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-30-P1e  Ebu-Mir-30-P1g  Ebu-Mir-30-P2e  Ebu-Mir-30-P2f  Ebu-Mir-30-P2g 
Orthologues
Node of Origin (locus) E. burgeri
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)		 FYBX02009227.1: 519673-519731 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-30-P1f)		 Mir-30-P1f FYBX02009227.1: 519673-519731 [+] UCSC Ensembl
Mir-30-P2f FYBX02009227.1: 519900-519958 [+] UCSC Ensembl
Seed GUAAACA
Precursor
(pre-Mir +30nt flank)		 
UGGGAAUCCAGCAAAAUGGCAGUGAAUGUUUGUAAACAUCCUUGACUGAAAGCUUCAAUCUGCUUAGCUUUCAGUCGGAUGUUUACUGCCGUUUGCUGUAUACGUCUCCACUGCAGAAC
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Structure
        10          20        30        40        50          
UGGGAAUCCAGCAAAAUG--|   UG    UUU          UU           UCAAU 
                    GCAG  AAUG   GUAAACAUCC  GACUGAAAGCU     \
                    UGUC  UUGC   CAUUUGUAGG  CUGACUUUCGA     C
CAAGACGUCACCUCUGCAUA^   GU    CGU          --           UUCGU 
       110       100        90        80          70
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Ebu-Mir-30-P1f_5p
mirBase accessionNone
Sequence 
0- UGUAAACAUCCUUGACUGAAAGCU -24
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Star sequence

Ebu-Mir-30-P1f_3p* (predicted)
mirBase accessionNone
Sequence 
37- CUUUCAGUCGGAUGUUUACUGC -59
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