| MirGeneDB ID | Eca-Mir-574 |
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| Family name |
MIR-574 (all species) |
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| Species |
Horse (Equus caballus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Bta-Mir-574
Cfa-Mir-574
Cja-Mir-574
Cpo-Mir-574
Dno-Mir-574
Ete-Mir-574
Hsa-Mir-574
Laf-Mir-574
Mml-Mir-574
Mmr-Mir-574
Mmu-Mir-574
Ocu-Mir-574
Pab-Mir-574
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCA_002863925.1_EquCab3.0) |
CM009150.1: 90484145-90484202 [-]
UCSC
Ensembl
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| Seed |
ACGCUCA |
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Precursor
(pre-Mir +30nt flank) |
GGCCGAGGGCCCUGCGUGGGUGCGGGCGUGUGAGUGUGUGUGUGUGAGUGUGUGUCGCUCCGGGUCCACGCUCAUGCACACACCCACACGCCCGCACUCCGGGUCUGCCCCCUCGGCC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GGCCGAGGGCCCUGCGU- -| AGU UGUCGC
GG GUGCGGGCGUGUG GUGUGUGUGUGAGUGUG U
CC CACGCCCGCACAC CACACACGUACUCGCAC C
CCGGCUCCCCCGUCUGGG U^ C-- CUGGGC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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| Star sequence |
Eca-Mir-574_5p* |
| mirBase accession | None |
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| Sequence |
0- UGAGUGUGUGUGUGUGAGUGUGUG -24
Get sequence
|
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| Mature sequence |
Eca-Mir-574_3p |
| mirBase accession | None |
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| Sequence |
36- CACGCUCAUGCACACACCCACA -58
Get sequence
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