| MirGeneDB ID | Ete-Mir-105-P1 |
| Family name |
MIR-105 (all species) |
| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
| MiRBase ID |
|
| Paralogues |
|
| Orthologues |
Bta-Mir-105-P1
Cfa-Mir-105-P1
Cja-Mir-105-P1
Cpo-Mir-105-P1
Eca-Mir-105-P1
Hsa-Mir-105-P1
Mml-Mir-105-P1
Mmr-Mir-105-P1
Mmu-Mir-105-P1
Ocu-Mir-105-P1
Pab-Mir-105-P1
Rno-Mir-105-P1
|
| Node of Origin (locus) |
Eutheria
|
| Node of Origin (family) |
Eutheria
|
Genome context (echTel2) |
JH980398: 4387984-4388041 [+]
UCSC
|
| Seed |
CAAAUGC |
Precursor (pre-Mir +30nt flank) |
CUUGAAAGAGCUUCUGUGUGUGCAUUGUGGUCAAAUGCUCAGACUCCUGUUGUGGCUGUUUGUGCACCAUGGAUUUUGAGCAUGUGCUAUGGCGUCUACUUCUGCAGCAUUGCAAUCU
Get precursor sequence
|
| Structure | 10 20 30 40 50
CUUGAAAGAGCUUCUGU--| U A UG U A C - U GGCU
GUG GC U UGG CA AUGCUCAGA UCC UG UGU G
CAU UG G AUC GU UACGAGUUU AGG AC ACG U
UCUAACGUUACGACGUCUU^ C C GU - G U U C UGUU
110 100 90 80 70 60 |
| Deep sequencing |
|
| 3' NTU |
Unknown
|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
| Mature sequence |
Ete-Mir-105-P1_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UCAAAUGCUCAGACUCCUGUUGUG -24
Get sequence
|
| Star sequence |
Ete-Mir-105-P1_3p* (predicted) |
| mirBase accession | None |
| Sequence |
36- CCAUGGAUUUUGAGCAUGUGCU -58
Get sequence
|