MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-105-P1

Family name MIR-105 (all species)
Species Horse (Equus caballus)
MiRBase ID
Paralogues Eca-Mir-105-P2 
Orthologues Bta-Mir-105-P1  Cfa-Mir-105-P1  Cja-Mir-105-P1  Cpo-Mir-105-P1  Ete-Mir-105-P1  Hsa-Mir-105-P1  Mml-Mir-105-P1  Mmr-Mir-105-P1  Mmu-Mir-105-P1  Ocu-Mir-105-P1  Pab-Mir-105-P1  Rno-Mir-105-P1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009179.1: 125120699-125120756 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-105-P1)		 Mir-105-P2 CM009179.1: 125118250-125118308 [-] UCSC Ensembl
Mir-105-P1 CM009179.1: 125120699-125120756 [-] UCSC Ensembl
Seed CAAAUGC
Precursor
(pre-Mir +30nt flank)		 
GUUACAGGAUAUUGUGUGUGUGCAUCAUGGUCAAAUGCUGAGACUCCUUGGUGGCUGCUUAUGCACCAUGGAUGUUUGAGCAUGUGCUAUGGUGUCUACUUUUGCAACAUUGCCAUCU
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Structure
        10          20        30        40         50        
GUUACAGGAUAUUGUGU--|  U         U  A     G    -   U     GCUG 
                   GUG GCAUCAUGG CA AUGCU AGAC UCC UGGUG    C
                   CAU UGUGGUAUC GU UACGA UUUG AGG ACCAC    U
UCUACCGUUACAACGUUUU^  C         -  G     G    U   U     GUAU 
      110       100        90         80        70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Mature sequence

Eca-Mir-105-P1_5p
mirBase accessionNone
Sequence 
0- UCAAAUGCUGAGACUCCUUGGUG -23
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Star sequence

Eca-Mir-105-P1_3p* (predicted)
mirBase accessionNone
Sequence 
35- CCAUGGAUGUUUGAGCAUGUGCU -58
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