MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-105-P1

Family name MIR-105 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues Cja-Mir-105-P2 
Orthologues Bta-Mir-105-P1  Cfa-Mir-105-P1  Cpo-Mir-105-P1  Eca-Mir-105-P1  Ete-Mir-105-P1  Hsa-Mir-105-P1  Mml-Mir-105-P1  Mmr-Mir-105-P1  Mmu-Mir-105-P1  Ocu-Mir-105-P1  Pab-Mir-105-P1  Rno-Mir-105-P1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021937.1: 144015123-144015181 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-105-P1)		 Mir-105-P2 CM021937.1: 144013000-144013058 [-] UCSC Ensembl
Mir-105-P1 CM021937.1: 144015123-144015181 [-] UCSC Ensembl
Seed CAAAUGC
Precursor
(pre-Mir +30nt flank)		 
UGUUGUGGAUCUUCUGUGUGUGCAUCGUGGUCAAAUGCUCAGACUCCUGUGGUGGCUGCUCAUACACCACGGAUGUUUGAACAUGUGCUAUGGUGUCUACUUUUGCAACAUUGCCAUCU
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Structure
        10          20        30        40        50         
UGUUGUGGAUCUUCUGU--|  U         U  A   C      UC        GCUG 
                   GUG GCAUCGUGG CA AUG UCAGAC  CUGUGGUG    C
                   CAU UGUGGUAUC GU UAC AGUUUG  GGCACCAC    U
UCUACCGUUACAACGUUUU^  C         -  G   A      UA        AUAC 
       110       100        90         80        70        60
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Cja-Mir-105-P1_5p (predicted)
mirBase accessionNone
Sequence 
0- UCAAAUGCUCAGACUCCUGUGGUG -24
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Star sequence

Cja-Mir-105-P1_3p* (predicted)
mirBase accessionNone
Sequence 
36- CCACGGAUGUUUGAACAUGUGCU -59
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