MirGeneDB 3.0
MirGeneDB ID

Gpa-Mir-306

Family name MIR-306 (all species)
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues
Orthologues Aae-Mir-306  Aga-Mir-306  Bge-Mir-306  Dan-Mir-306  Dlo-Mir-306  Dme-Mir-306  Dmo-Mir-306  Dsi-Mir-306  Dya-Mir-306  Hme-Mir-306 
Node of Origin (locus) Neoptera
Node of Origin (family) Neoptera
Genome context
(GpalI1)		 Scaffold60: 383833-383895 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-306)		 Mir-9-P13 Scaffold60: 382083-382145 [-] Ensembl
Mir-9-P12-v1 Scaffold60: 382326-382387 [-] Ensembl
Mir-9-P12-v2 Scaffold60: 382326-382387 [-] Ensembl
Mir-306 Scaffold60: 383833-383895 [-] Ensembl
Mir-9-P11 Scaffold60: 384436-384498 [-] Ensembl
Seed CAGGUAC
Precursor
(pre-Mir +30nt flank)		 
UAAAAAAAGAAAAAAAAAGAACACAUUUGUACAGGUACUUAGUGACUCUCAAUGAUUGUAUUAAAUGGUUUGAGUGUCAUUCUGUACCUUCACGAAAGUUUUCUAAACGCAACAAAUCGAUAU
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Structure
        10          20        30        40        50        60 
UAAAAAAAGAAAAAAAA--|   C  A     AC      UU      U     UGAUUGUA 
                   AGAA AC UUUGU  AGGUAC  AGUGAC CUCAA        \
                   UCUU UG AAGCA  UCCAUG  UUACUG GAGUU        U
UAUAGCUAAACAACGCAAA^   U  A     CU      UC      U     UGGUAAAU 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
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Mature sequence

Gpa-Mir-306_5p
mirBase accessionNone
Sequence 
0- ACAGGUACUUAGUGACUCUCAA -22
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Star sequence

Gpa-Mir-306_3p*
mirBase accessionNone
Sequence 
41- GAGUGUCAUUCUGUACCUUCAC -63
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