MirGeneDB 3.0
MirGeneDB ID

Gpa-Mir-92-P4

Family name MIR-92 (all species)
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues Gpa-Mir-92-o62  Gpa-Mir-92-P3 
Orthologues Aae-Mir-92-P4  Aga-Mir-92-P4  Asu-Mir-92  Bfl-Mir-92-o4  Bge-Mir-92-P4  Bla-Mir-92-o4  Cel-Mir-92  Dan-Mir-92-P4  Dlo-Mir-92-P4  Dma-Mir-92-P4  Dme-Mir-92-P4  Dmo-Mir-92-P4  Dpu-Mir-92-P4  Dsi-Mir-92-P4  Dya-Mir-92-P4  Esc-Mir-92  Gsp-Mir-92  Hme-Mir-92-P4  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92  Tca-Mir-92-P4 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Bilateria
Genome context
(GpalI1)		 Scaffold58: 1294167-1294231 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P4)		 Mir-92-P3 Scaffold58: 1279284-1279346 [+] Ensembl
Mir-92-P4 Scaffold58: 1294167-1294231 [+] Ensembl
Seed AUUGCAC
Precursor
(pre-Mir +30nt flank)		 
AUUUUUUUUUCUUUUGGUCACACAGUAUGUAGACCGUGCCUAGUGCUUAUUUGUGACAUUUUAAUUUAAUUCAAAUUGCACUAGUCCCGGCCUGCAAAUUGUGACUUUAUCAGCAUUAUAUAAAA
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Structure
        10        20          30        40        50        60  
AUUUUUUUUUCUUUUGGUCA--|     A     A   UGC       UU     UGACAUUU 
                      CACAGU UGUAG CCG   CUAGUGC  AUUUG        U
                      GUGUUA ACGUC GGC   GAUCACG  UAAAC        A
AAAAUAUAUUACGACUAUUUCA^     A     C   CCU       U-     UUAAUUUA 
   120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
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Star sequence

Gpa-Mir-92-P4_5p*
mirBase accessionNone
Sequence 
0- AGACCGUGCCUAGUGCUUAUUUG -23
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Mature sequence

Gpa-Mir-92-P4_3p
mirBase accessionNone
Sequence 
43- AAUUGCACUAGUCCCGGCCUGC -65
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